Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00461 ATGATGCCAGGCAATGGACAGTTAACAGTTCCTCCTGGCTTCAGGTTCCACCCTACTGATGAGGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTCATAAGAGAAGTGGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGACAAATGTAGGATTGGGTCAGGGCCTCAGAATGAGTGGTATTTCTTCAGCCACAAGGATAAGAAATACCCAACAGGAACAAGAACAAATCGAGCAACTACAGCTGGTTTTTGGAAAGCAACTGGAAGGGACAAGGCCATATACCACACTAATTCCAAGAGGATTGGCATGAGGAAAACCCTAGTTTTCTACACTGGTCGTGCTCCTCATGGCCAGAAGACTGATTGGATCATGCACGAGTATCGCCTTGATGAAGATGATACTGATGTTCAGGAAGATGGGTGGGTGGTATGCAGGGTTTTCAAAAAGAAAAACCAAAATCGAGGTTTCCAGCAAGAAATTGAAGAAGAAGAAAACTTAACCCACATGAGAACAAGTGGTCCTTGCCATGTTCTAGAGCCAAAACATCACATGCAAGGAGGACTATATGACTACAACTTTGATGGCACAATGCACCTTCCACAGTTGTTCAGTCCAGAAACAGCTGTTGCACCAACCACTACTTCCTTGGCCACATCCATGAATGCCATGGACATCCTTGAGTGCTCTCAAAACTTGTTGAGGCTCACAACTACTGGCTGTGGACTGAATCTTATGCAACAACAAGGAGAGAGGTTCAGTGGTGACTGGTCATTCTTGGACAAGCTTCTAGCATCCCACCATGGCATGGATCATCACCATCATCCACAAAGCAAATGTAATCCTCCCACTCACCAAGCTGCAACTTCTGCTGGCACTTCAGCTCAGAAGTTCCCATTCCATTACCTTGGCTGTGACACCCATGATATCATGAAATTTTCCAAGTAG 975 0.4492 MMPGNGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDTDVQEDGWVVCRVFKKKNQNRGFQQEIEEEENLTHMRTSGPCHVLEPKHHMQGGLYDYNFDGTMHLPQLFSPETAVAPTTTSLATSMNAMDILECSQNLLRLTTTGCGLNLMQQQGERFSGDWSFLDKLLASHHGMDHHHHPQSKCNPPTHQAATSAGTSAQKFPFHYLGCDTHDIMKFSK 324
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00461 324 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Phco10g00461 324 FunFam NAC domain-containing protein 19 163 - -
Phco10g00461 324 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Phco10g00461 324 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Phco10g00461 324 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Phco10g00461 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 246 - -
Phco10g00461 324 MobiDBLite consensus disorder prediction 278 300 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco10g00461 Phco-Chr10 4369322 4370791 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco10g00461 NAM 2.1e-38 No_clan