Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00456 ATGAAGTATGTGTTGGTGACTGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGCCTGATCCTCAAAGCATGTGGTCTTAGAGTTACCTCTATCAAGATTGATCCCTACTTGAACACTGATGCAGGAACAATGTCTCCTTTCGAGCATGGGGAGGTTTTCGTCTTAGATGATGGTGGAGAGGTTGACCTTGATCTTGGAAACTATGAGCGATTTTTAGACATCAAATTAACTCGAGACAATAATATCACTACTGGGAAAATTTATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACAGTACAGGTAGTTCCACACATAACAGATGCTATCCAAGAGTGGATAGAACGTGTGGCAAAGATACCAGTTGACGGGAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGCCAGTTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCATGTCAGCTTGGTTCCTATTCTCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGAATTTCGAAGGAACTTGATGATAATGTCAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAACATACTTACTCTCCATGATGTTCCAAACATTTGGCATATTCCTCTGCTATTGAAAGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACCTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTGCAAGGACAAAAATTTATGACAGATGTGATGAAACTGTTAGAATTGCAATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTTCGGTTGCTCGAAACCGAAAACTTAGTGTGGACTGGGTTCCGGCTGGGGATCTTGAAGAAGTCACTTATAAAGAGGATCCTGAGGCATATAAAACTGCTTGGAATCTTTTAAAGGGCGCTGATGGTGTTCTAGTTCCTGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAGCATAATGTTCCATTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTATGCACGATCTGTTCTTGGTCTGCATGATGCCACTAGCACAGAATTTAATCCTGAAACCAAGACCCCTTGTGTCATATTTATGCCAGAAGGCTCAAAAACTCATATGGGGGCAACTATGCGACTTGGTTCAAGAAGAACCTACTTTGAAGTTGCTGACAGCAAATCTGCAAAATTGTATGGCAATGTAAGCTTTATTGATGAGCGACATCGACATAGATACGAGGTTAATCCTGACATGGTATCACAGCTAGAGACTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAGGCGCATGGAAATAGTTGAATTGCCTAGCCATCCTTTTTATATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGAAAACCTTCTCCACTCTTCTCAGGATTAATAGCAGCAGCAAGTGAACCAAGGTGGAAGGTGTCAAATGGTTATTCCAAGTTGACTGCGTGGAATAGACACTCACCAAAACTGAAAGCACACCAAAATGTAAAGGGCTTCAAAGCATCCAATGGTTCCTTGAATGGTGTATATACCAATGGCAATGGTGTGTATGTGGATGGTAGTTGGTAG 1809 0.4306 MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRISKELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTARTKIYDRCDETVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLSVDWVPAGDLEEVTYKEDPEAYKTAWNLLKGADGVLVPGGFGDRGVQGKILAAKYAREHNVPFLGICLGMQIAVIEYARSVLGLHDATSTEFNPETKTPCVIFMPEGSKTHMGATMRLGSRRTYFEVADSKSAKLYGNVSFIDERHRHRYEVNPDMVSQLETAGLSFVGKDETGRRMEIVELPSHPFYIGVQFHPEFKSRPGKPSPLFSGLIAAASEPRWKVSNGYSKLTAWNRHSPKLKAHQNVKGFKASNGSLNGVYTNGNGVYVDGSW 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00456 602 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Phco10g00456 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Phco10g00456 602 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Phco10g00456 602 NCBIfam CTP synthase (glutamine hydrolyzing) 1 545 IPR004468 GO:0003883|GO:0006221
Phco10g00456 602 Gene3D - 1 292 IPR027417 -
Phco10g00456 602 SUPERFAMILY Class I glutamine amidotransferase-like 297 548 IPR029062 -
Phco10g00456 602 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Phco10g00456 602 FunFam CTP synthase 295 559 - -
Phco10g00456 602 PANTHER CTP SYNTHASE 1 548 IPR004468 GO:0003883|GO:0006221
Phco10g00456 602 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Phco10g00456 602 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Phco10g00456 602 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Phco10g00456 602 Gene3D - 294 556 IPR029062 -
Phco10g00456 602 FunFam CTP synthase 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00456 Phco-Chr10 4271592 4276791 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01981 9 44735579 44741543 Phco10g00456 10 4271592 4276791 PCT