Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00397 ATGTGGAGATTTAAGCCATTCGGCCACAAAGAGCAGACTGGTCTTGAAGGCCGCACTGTAGATGTTGGCAATCTTAAAATAAACATTGTTAAGGCCATTGCGGAAGGAGGGTTCTCTTGTGTCTACGTAGCTCGTGATGCTGTACATATGTCAAAGCAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCACTTGGATTGGTAAAGAAGGAGATATCTGTGATGAAGATGCTGGTAGGACATCCCAATGTTGTCACACTTCTTGCACATTCTATCTTTGATATGGGTAGGACAAAGGAGGCATTCCTTGTGATGGAATTTTGTGAGAAGTCTCTGGTCAGTGTGCTGGAGAGCCGCGGAGCTGGTTATTTTGATGAGAAACAGGTTCTTTTGATCTTCAGGGATGTCTGTAATGCAGTTTTTGCTATGCACTGCCTGTCCCCACCTATTGCACACCGAGACTTGAAAGCGGAGAATCTTTTATTAAGTTCAGATGGCTTATGGAAGTTATGTGATTTTGGAAGCACTTCCACTAATCACAAACGTTTTGAAAAGCCAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGTACACAACTCCAGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAGGTCATTAATGAGAAGGTAGACATTTGGGCTCTTGGATGTCTTCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGACGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGTATTCCTGATTTACCAAAATACAATTCATCTATCACGGACTTGATAAGAGACATGCTCCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAACGAGCAACTGCCCATTAATCTACAGAAGTCATTACCTGACAGACCACCTGAATCACCCTCACCCAGCAATCATGAAGGTGTGTCATTGCCCTCAAACAGATCACCTCCAATGCCTCGTAGGAACCCACCTCCTCCACCTTCATCTGGAGAACCCAAAACTACACCACAGCCATCCCTTGCTTCTAAGGGAGGGGGCAGTGGGGGGCAGCTTGGTGCTTTCTGGTCTAGTCAGCACGCAAAGGATCCACTTGTCACTGAGGACAAGAGCAAACCAATTTTTGATGAAGAACCATCTAGCCACCATATGTCACTGAAACATGATAGTCTTCGTCCTGAAATTGAACAATTAGCCAAAAATCTTAATACTGGCAAAGTGGTTAATGCACAAACTCATACTGTGAAAAGCAGTACACATGGAAAATTACACAAGCCTGATACCACACCCTCAAAGGATTTTGAAATAAACTTATTCCAAGATAAAGATCGTATGGAGAATACAGCTAACTTTCAAAACCAGGCTTTTAACACTTTTGTTGCTGAATTCGATACCACTAAGCTCAACACTGGAGTTAATAACAAATCCGAAAGGGAACAAGCATTAGAGGCTGAAGTGGAGAAACTCAAAGAGCAGCTGAAGGAAGCTAACGTGGAAAAAGCAGAAATAACATCCAAGTTTGAAAAGCTTTCTGCTATATGTCGATCTCAAAGGCAAGAATTGCAGGATCTCAAGCAAGCACTGGCAGCTCGGACTCCTTCACCAAGTAGAGAGGGTTTGAAAACCTCTCCTGCAGTTACATCATCTGCACCTATGCAGCAGGATAGAACTGAATGGAAAACTCCTAGTTCAGAACCTAAGTCATGGCAAGCTTTTCCTGAGGAACCCCAACAACAAAAGTCCCTCTCAGCAGAAAATACTACCAAATCAGTCAGGACGAATAATGGCCGGCAGAACAAGCAACCTGTTCCACTAGCTACTACTTTTGATTCATGGGGTTTTGGAACTGATAGCTTCAGTGCTGTACCTAGTGGCAGCTCACAGATGCAAAGACCTAGCACTGCGGGAGGTAAGTCTCAGGGTTTTGGTGAGGCAAAGGCCTTTGAGAGCAAACCAACTTCTCAACCAGCTGGTTGGGCTGGTTTTTAA 2025 0.439 MWRFKPFGHKEQTGLEGRTVDVGNLKINIVKAIAEGGFSCVYVARDAVHMSKQYALKHMICNDEESLGLVKKEISVMKMLVGHPNVVTLLAHSIFDMGRTKEAFLVMEFCEKSLVSVLESRGAGYFDEKQVLLIFRDVCNAVFAMHCLSPPIAHRDLKAENLLLSSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYNSSITDLIRDMLQARPDDRPDITQVWFRVNEQLPINLQKSLPDRPPESPSPSNHEGVSLPSNRSPPMPRRNPPPPPSSGEPKTTPQPSLASKGGGSGGQLGAFWSSQHAKDPLVTEDKSKPIFDEEPSSHHMSLKHDSLRPEIEQLAKNLNTGKVVNAQTHTVKSSTHGKLHKPDTTPSKDFEINLFQDKDRMENTANFQNQAFNTFVAEFDTTKLNTGVNNKSEREQALEAEVEKLKEQLKEANVEKAEITSKFEKLSAICRSQRQELQDLKQALAARTPSPSREGLKTSPAVTSSAPMQQDRTEWKTPSSEPKSWQAFPEEPQQQKSLSAENTTKSVRTNNGRQNKQPVPLATTFDSWGFGTDSFSAVPSGSSQMQRPSTAGGKSQGFGEAKAFESKPTSQPAGWAGF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00397 674 Coils Coil 484 539 - -
Phco10g00397 674 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
Phco10g00397 674 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Phco10g00397 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Phco10g00397 674 PANTHER SERINE/THREONINE PROTEIN KINASE 1 658 - -
Phco10g00397 674 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00397 674 SUPERFAMILY Protein kinase-like (PK-like) 28 343 IPR011009 -
Phco10g00397 674 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00397 674 MobiDBLite consensus disorder prediction 301 367 - -
Phco10g00397 674 CDD STKc_GAK_like 26 298 - -
Phco10g00397 674 MobiDBLite consensus disorder prediction 329 346 - -
Phco10g00397 674 MobiDBLite consensus disorder prediction 548 649 - -
Phco10g00397 674 MobiDBLite consensus disorder prediction 537 674 - -
Phco10g00397 674 Pfam Protein kinase domain 30 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00397 674 MobiDBLite consensus disorder prediction 425 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00397 Phco-Chr10 3601827 3605120 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Phco10g00397 Pkinase 4.6e-38 CL0016