Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00388 ATGGGGAAGTTATCAATCATGTTGCAGGGTAAGTACAAGAACCGCAAGGAATCATCATCATGGCCATTAGCAAAATGTTTTAACCACATTCATAGAAGAGATATTGGCATGGGAATTGCACAAGAATGGAATATTGATTTTTCTGATCTCTTCATTGGGTACAAGTTTTCTCATGGTGCTCACAGTCAAATTTACCATGGTATATACAAGCAGCAAGATGTTGCCATTAAAATTTTCAAGGTACGAGAATGTGAGGAAAAGGGAAACCTTAGATCTCTTTTAGAGACACAATTTTTGAGAGAAATCACACATCTACCTCGTCTGCACCATCAAAATGTGGTGACTTTCATGGCAGCTTACAAAGACAGTGATTCTTATTACATTCTCACGGAGTATCAACAAAAGGGGTCTTTAAGGGTATATTTGAACAAGCTTGAGTCCAAGCCAATTTCTCTCAAAAAGGTCGTAGCTTTTGCTTTGGATATTGCTCGTGGAATGGAGTATGTGCATGCACAAGGTATCATTCATAGAGACCTTAAACCTGAGAATGTCCTTGTAGATAGGGACTCTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGCTTCAAAGTGTGATTCGTTGAGGGGTACATATCGCTGGATGGCACCAGAGATGATCAAAGGCAAAAGTTATGGGAGGAAGGTTGATGTGTACAGTTTTGGGCTTATTTTGTGGGAGCTGGTGAGTGGAACACTGCCATTTGAGGACATGAATCCAGTTCAGGTTGCTGTTGCAGTAGCAGATAGGAATTCAAGGCCTGTTCTTCCCACACATTGCCCACAAGGTTTGAGAGATTTGATCAATCAATGTTGGGCCTCGAAACCAGAGAAGAGACTTGAATTCTGGCAGATTGTTCGAGTTTTGGAGCAATTGAGCAAAGAAATTTTTCTCTGA 939 0.4079 MGKLSIMLQGKYKNRKESSSWPLAKCFNHIHRRDIGMGIAQEWNIDFSDLFIGYKFSHGAHSQIYHGIYKQQDVAIKIFKVRECEEKGNLRSLLETQFLREITHLPRLHHQNVVTFMAAYKDSDSYYILTEYQQKGSLRVYLNKLESKPISLKKVVAFALDIARGMEYVHAQGIIHRDLKPENVLVDRDSHLKIADFGIACEASKCDSLRGTYRWMAPEMIKGKSYGRKVDVYSFGLILWELVSGTLPFEDMNPVQVAVAVADRNSRPVLPTHCPQGLRDLINQCWASKPEKRLEFWQIVRVLEQLSKEIFL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00388 312 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 43 306 - -
Phco10g00388 312 CDD STKc_MAP3K-like 58 303 - -
Phco10g00388 312 PIRSF ILK 28 311 - -
Phco10g00388 312 PRINTS Tyrosine kinase catalytic domain signature 230 252 IPR001245 GO:0004672|GO:0006468
Phco10g00388 312 PRINTS Tyrosine kinase catalytic domain signature 168 186 IPR001245 GO:0004672|GO:0006468
Phco10g00388 312 PRINTS Tyrosine kinase catalytic domain signature 274 296 IPR001245 GO:0004672|GO:0006468
Phco10g00388 312 PRINTS Tyrosine kinase catalytic domain signature 130 143 IPR001245 GO:0004672|GO:0006468
Phco10g00388 312 PRINTS Tyrosine kinase catalytic domain signature 211 221 IPR001245 GO:0004672|GO:0006468
Phco10g00388 312 ProSiteProfiles Protein kinase domain profile. 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00388 312 Gene3D Phosphorylase Kinase; domain 1 39 134 - -
Phco10g00388 312 SMART serkin_6 50 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00388 312 Gene3D Transferase(Phosphotransferase) domain 1 135 311 - -
Phco10g00388 312 SUPERFAMILY Protein kinase-like (PK-like) 21 303 IPR011009 -
Phco10g00388 312 Pfam Protein tyrosine and serine/threonine kinase 55 303 IPR001245 GO:0004672|GO:0006468
Phco10g00388 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00388 Phco-Chr10 3526102 3527040 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco10g00388 PK_Tyr_Ser-Thr 1.3e-61 CL0016