Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00348 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAGGCGTGCAACCTGTTCTGCCTCCCTGAGAACTACCAGATGAAGTACTATTTCTATCACATCCTCTCATGGCCTCAGCTTCTCCATGTCGCCGAAGACTACAACGGTCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAGGAGACCACCGACTGCCACGGTCATATCACCTCCCTCGCCGTCCTCCGCACCCACCGTAAACTCGGTCTCGCCACCAAACTCATGACCGCCTCCCAGAACGCCATGGAACAGGTGTTTGGTGCCGAGTACGTGTCCCTGCACGTGCGCAAGAGCAACCGCGCGGCCTACAATTTGTACACCGAGACCTTGGGGTACAAGATTCATGATGTGGAAGCTAAGTATTATGCGGACGGAGAGGATGCTTATGACATGAGGAAGCAGCTCAAGGGGAAGCAGCAGCAGCAGCACCATCATCACCACCATCACCACCACCACCACCACCATCACGAACATGGAGGCATGTGTTGTTCCGGGGAGGTCAAGGGGAATGCCAAAGCCACCTGA 573 0.562 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLHVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTASQNAMEQVFGAEYVSLHVRKSNRAAYNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQQQQHHHHHHHHHHHHHHEHGGMCCSGEVKGNAKAT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00348 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Phco10g00348 190 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 173 IPR045047 GO:0004596|GO:0006474|GO:0031415
Phco10g00348 190 MobiDBLite consensus disorder prediction 154 174 - -
Phco10g00348 190 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Phco10g00348 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Phco10g00348 190 Gene3D - 2 182 - -
Phco10g00348 190 FunFam N-alpha-acetyltransferase daf-31-like 2 178 - -
Phco10g00348 190 MobiDBLite consensus disorder prediction 150 190 - -
Phco10g00348 190 CDD NAT_SF 45 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00348 Phco-Chr10 3138390 3139161 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco10g00348 Acetyltransf_1 3e-15 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00348 10 3138390 3139161 Phco10g00348 10 3138390 3139161 ECH