Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00325 ATGAAGTGTGCAACTATCTGTGCATATCAACAGGGAAAGCGCTTTCTCATCTACCCAGTGTTTCTTGTCCCAGTGTTTCTCGAACCCAGGGGCATATTGAGTCAGCCTTATCTCTATCTTGGAAAGCCAAAACTTTATATCGAAGTTCTCTCCATGTGGACTTTGCTCCGGCTGCGGTTGTTCGATGCCACACTTTCGTTATTTTCGATCATAAGTGACAGAAGAAGAAGACTTGGGTGTGAAAAGGATGGTGAAGAGGAGTGTGTTGTAGGAGATATAATGGAGCTACACAACATAAGAGTGCACGCAACACAAGAAAAGTGCAGCTGTCTGCGCTTTCGCATCTACCAAGTATTGACTTGTTTGTTCTCTGCTTTGTCCAAGGAGAAATCACCAAGTGAATTGTCTAGCCTTCAACATGAATCCGATTTTGTTTTGGAGGATCTTCCTAAGGTTTTCCTTGCTATCCTCATCATCTACCACTATGGAACAAGTTCACCATATCAATGGATGAGGGAGCTGAGATGGGACTTCCAGGGATTAAATCCAATAAGCCTTCTCATTGACTGTGCCAAATGTGTTGCATCTGGAAGCATTAAGAATGCAGATATTGGCCTTGAGTACATATCTCAGATTTCATCTCCTGATGGTAATGCAGTGCAGAGGATGGTGAGTTATTTCAGTGAAGCACTTGGATACAGGATAATAAAACATTTGCCTGGTGTATACAAATCTATCAATCCCTCAAAAACATCACTATCTTCAGAGGATATCCTTGTTCAGAAATACTTCTATGAATTGTGTCCCTTTTTGAAGTTCTCATACTTGATCACAAACCAAGCCATTGTGGAGGCCATGGAATGTGAAAAGGTGGTTCACATTATTGATCTCCATTGTTGTGAGCCAGCTCAATGGATAGATCTTCTACTCACTTTTAAAAACCGTCAGGGAGGTCCACCCCATCTGAAAATTACAGGCATTCATGAGACGAAAGAAGTCTTAGACCAGATGAACTTTCATCTGACATCTGAAGCTGGGAATTTGGATTTTCCTTTACAGTTCTATCCAGTTGTTAGCAAACTAGAAGATGTTGACTTTGAGAAGTTGCCTGTTAAGACAGGAGATGCTATTGCAATAACTTCAGTTCTTCAGCTGCATTCGCTTCTTTCCACTGATGATGACATGGCTGGAAGAATCTCCCCAGCCGCAGCAGCATCTATGAATCTGCAGAGAGCAGTGCATATGGGCCAAAGAACTTTTGCTGAGTGGCTTGAGAGAGATATGATCAATGCATATATCTTGAGTCCTGATTCAGCATTGTCACCTCTTTCATTTGGTGCCTCGCCTAAGATGGGGATTTTTCTGAACGCCATGCGAAAGCTCCAACCGAAACTGGTAGTGGTTACTGAACAAGAGTCAAATCTGAATGGATCAAATTTGATGGAGAGAGTTGATAGAGCATTGTACTTTTACAGTGCGTTGTTTGACTGCTTGGACTCTACTGTAGTGAGAACATCAGTTGAGAGGCAAAAACTTGAGAGGATGCTTCTTGGAGAACAGATAAAAAACATCATTGCTTGTGAGGGAGTTGATAGAAAAGAAAGACATGAGAAACTCGAAAAATGGATTCGAAGGCTTGAAATGGCTGGTTTTGTAAAGGTACCTTTAAGCTACAATGGGAGGATAGAAGCAAAGAATCTGTTGCAGAGATATAGTTGTAAATACAAATTTAGAGAAGAGAATGATTGTTTGCTTGTCTGCTGGAGCGACAGACCATTGTTTTCTGTATCAGCTTGGAGTTTTAAGAGATGA 1812 0.4139 MKCATICAYQQGKRFLIYPVFLVPVFLEPRGILSQPYLYLGKPKLYIEVLSMWTLLRLRLFDATLSLFSIISDRRRRLGCEKDGEEECVVGDIMELHNIRVHATQEKCSCLRFRIYQVLTCLFSALSKEKSPSELSSLQHESDFVLEDLPKVFLAILIIYHYGTSSPYQWMRELRWDFQGLNPISLLIDCAKCVASGSIKNADIGLEYISQISSPDGNAVQRMVSYFSEALGYRIIKHLPGVYKSINPSKTSLSSEDILVQKYFYELCPFLKFSYLITNQAIVEAMECEKVVHIIDLHCCEPAQWIDLLLTFKNRQGGPPHLKITGIHETKEVLDQMNFHLTSEAGNLDFPLQFYPVVSKLEDVDFEKLPVKTGDAIAITSVLQLHSLLSTDDDMAGRISPAAAASMNLQRAVHMGQRTFAEWLERDMINAYILSPDSALSPLSFGASPKMGIFLNAMRKLQPKLVVVTEQESNLNGSNLMERVDRALYFYSALFDCLDSTVVRTSVERQKLERMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYSCKYKFREENDCLLVCWSDRPLFSVSAWSFKR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00325 603 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 166 596 IPR005202 -
Phco10g00325 603 Pfam GRAS domain family 184 599 IPR005202 -
Phco10g00325 603 ProSiteProfiles GRAS family profile. 174 600 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00325 Phco-Chr10 2937952 2944246 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco10g00325 GRAS 2.7e-117 CL0063