Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00324 ATGGCCATGTCTGATTGCCAATGTAGTGAGAAGTCGAGAGGTTGCTTGGTGGTGTACATTGTCTTTTGGATGCCAAAGGACCAACTCATGGACACAGATTCACCATACCCGTGGCTCAAAGATATGAATGGGGAGGATAGGGATAAATACCTGGCTCGTATTCTTAATGCCTGTGCCAAGTTTATTGAATCAGGAAGCATCATGAATGCAGATACTGGACTGGACTATATTGCTCACATTGCCTCCCCTTATGGTGATGCAATGCAAAGGGTAGCTACCTATATCAGTGAGGGTCTAGCTTTCCAAGTCCTGAAAAATTTGCAGGGAGTACCTAAAGCTGTTAATCTGTCAAAAACAATGTCAACCTCGGAGGAACAACTTGTTAAGAAGACATTCTATGACTTGTATCCATTTTTAAAGACTGCATATGTAATCACAAGTCATGCCATTGCTGAAGCAATTGAAGGAGAAGAAGTGGTCCACGTCATTGATCTATGTGCATCTGATGCTGCTCAGTGGATTTATCTTATGCATAGATTAAAAGAAAGCCAAAAGAGCCCCCCAGTTCTGAAAATCACAGGCATACATGAGAAGAAGGAAATTCTAGAGGAAGTGGCCACTCAACTAAGAGTAGAAGCTAAAAGTTTGCATTTCAATCTCCAATTCAATGCTATTGAAAGCACTTTGGAGAATCTTGACCTTGAAGAATTGCCTGTGCAGAAAGGAGAGCCTCTTGCAATCAGCTCAGTGCTTCAGCTGCACACTCTTCTGGCCACTGATGATGCAATGGTCTGCATCAGGAGCTCGCAGGAAGAACCAATGCATCAAAGGACATTTGCTGAGATGCTTGGGAAGCAAAAGACCAACCCCAGTTCTGAATCATCGTTGTTACAGCTTCCTCTGTGTGCTACTTCAACCAAGATGATGCACTTTCTAAATGGCCTGTGGAAACTCCAACCTAGAGTGATGGTGGTTACGGAACAAGAATCCAATGTCAATGGTTCTTTGACAGAAAGGGTCGACAAAGCATTGGACTTTTACGGTGCATTATTCAACTGTTTGGAATCAACTGTTTCAACAACACTAGTAGAGAGAATCATCATGGAGAGGACACTACTAGGGCAAGAAATAAAGAACATTGTTGCAGGTGAAGGAGTTGAGAGAAAGGAGAGGCATGAGAAATTTGAGACTTGGATCCCAAAGCTAGAAATGGCCGGGTTTGAGAAGAGACATATTAGCCATCATGGGATGATGCAAGCAACAAAACAGTTGCATGGTTATGGAAATGGATACAATCTTTGTCCGGAGAATAATTGTTTGTTTGTATGCTGGAATGATAAGCCACTATTTTCTGTGTCAGCCTGGACAGTTTAG 1374 0.425 MAMSDCQCSEKSRGCLVVYIVFWMPKDQLMDTDSPYPWLKDMNGEDRDKYLARILNACAKFIESGSIMNADTGLDYIAHIASPYGDAMQRVATYISEGLAFQVLKNLQGVPKAVNLSKTMSTSEEQLVKKTFYDLYPFLKTAYVITSHAIAEAIEGEEVVHVIDLCASDAAQWIYLMHRLKESQKSPPVLKITGIHEKKEILEEVATQLRVEAKSLHFNLQFNAIESTLENLDLEELPVQKGEPLAISSVLQLHTLLATDDAMVCIRSSQEEPMHQRTFAEMLGKQKTNPSSESSLLQLPLCATSTKMMHFLNGLWKLQPRVMVVTEQESNVNGSLTERVDKALDFYGALFNCLESTVSTTLVERIIMERTLLGQEIKNIVAGEGVERKERHEKFETWIPKLEMAGFEKRHISHHGMMQATKQLHGYGNGYNLCPENNCLFVCWNDKPLFSVSAWTV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00324 457 ProSiteProfiles GRAS family profile. 42 456 IPR005202 -
Phco10g00324 457 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 452 IPR005202 -
Phco10g00324 457 Pfam GRAS domain family 52 456 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00324 Phco-Chr10 2933744 2937082 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco10g00324 GRAS 3.4e-100 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00324 10 2933744 2937082 Phco10g00324 10 2933744 2937082 ECH