Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00310 ATGAAGCGTAAATGGTGTAGTATGGAAAAGAAAACTCTTGAAGAATTCTCCAAAGATGAATCATCAATACTTAAGCTTCTATGGATTATGCAAGGAGAAAAGGATCCTCAAAAATGGCATGAAAACATTTTTGGTAACAAAAGATGCAAGCACTCCCAAAACTTTGTTGAAGAATCGTCAGAGTCATCAAAATCTAAAGATGGTAGAGATGTTTCTTTAAAAAATTTATATCAAGAAACTCAATTCTCCACTGAAATTTCATCACCAGAGGTATGTTTTTCCTCACAAGAATATCTCATTCATGATAGTTATAGTCCTTCCTCTTTGCCACTTATGAAGAATTTTAGAGAGTATATCTTAGAGCATGGTGAACCTCTTCACAAGCAACTCACAATGAGTGATGTGAATGTCAATCAAAATAGACTTCTTCTCAACAAAAACCATGTTGAAAAATCATTTTTACCATTGTTGAAAAATGATGAAAATATTGAGAGAGGAATTCAAGTTTGCGTTTATGATGCTCATCAAAATACTTATAGTTTGATATTCAAGAAGTGGACAAATAAATATTATGTGTTGAATGGTGGGTGGAAAGATTTCTTCCAAGTCCATAAACTACAGAAGAATGATACCATTACAATATGGATATTTCGTCATTCAAGTTTTAACAAATTATGTTTCGCTATTGACTATAAGAAGATTGAAAGGCGACGAGATACAAAACCTATCATGATTGGTTTACATCATTTGTAA 753 0.3201 MKRKWCSMEKKTLEEFSKDESSILKLLWIMQGEKDPQKWHENIFGNKRCKHSQNFVEESSESSKSKDGRDVSLKNLYQETQFSTEISSPEVCFSSQEYLIHDSYSPSSLPLMKNFREYILEHGEPLHKQLTMSDVNVNQNRLLLNKNHVEKSFLPLLKNDENIERGIQVCVYDAHQNTYSLIFKKWTNKYYVLNGGWKDFFQVHKLQKNDTITIWIFRHSSFNKLCFAIDYKKIERRRDTKPIMIGLHHL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00310 250 SMART B3_2 126 229 IPR003340 GO:0003677
Phco10g00310 250 Gene3D - 124 238 IPR015300 -
Phco10g00310 250 SUPERFAMILY DNA-binding pseudobarrel domain 127 234 IPR015300 -
Phco10g00310 250 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 105 230 IPR005508 GO:0003677
Phco10g00310 250 CDD B3_DNA 128 229 IPR003340 GO:0003677
Phco10g00310 250 Pfam B3 DNA binding domain 128 222 IPR003340 GO:0003677
Phco10g00310 250 ProSiteProfiles B3 DNA-binding domain profile. 127 233 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phco10g00310 B3 1.8e-08 CL0405