Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00272 ATGGGTATGGCTGCAGAGGCACAGTTTCATGTTTTGGCTGTTGATGATAGTGTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCTTTTCATGTCACTGCCGTGGATTCTGGGAGTAAGGCTTTGAGGTTTCTTGGTTTAGTTGAAGATGAAAAGAGAACTGAAGAGCCTCCCACTATTTCTCTAGAAGCCAATCAGGATGTAGAAGTAAACCTGATCATAACTGATTACTGTATGCCAGAAATGACAGGGTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAACAGATGCCTAGAAGATGGAGCTGATGAATTCTTTTTGAAACCAGTTCAACAGTCAGATGTAAACAGGCTCAGACCCCATTTGTTGAAATCAAAAGTTAAGGATGAAGAAGAGCAACAAATCAGTAATAAAAGGAAGGAAACAGAAGAAAGGCATTCCCCAGAGAAAACTAGGACAAAAATGGAGCCTCAAAAAGTGGTTAATTCCAGTTAA 564 0.3954 MGMAAEAQFHVLAVDDSVIDRMLIERLLKTSSFHVTAVDSGSKALRFLGLVEDEKRTEEPPTISLEANQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEDGADEFFLKPVQQSDVNRLRPHLLKSKVKDEEEQQISNKRKETEERHSPEKTRTKMEPQKVVNSS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00272 187 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Phco10g00272 187 CDD REC_typeA_ARR 11 141 - -
Phco10g00272 187 Gene3D - 10 185 - -
Phco10g00272 187 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Phco10g00272 187 SMART REC_2 9 145 IPR001789 GO:0000160
Phco10g00272 187 SUPERFAMILY CheY-like 9 150 IPR011006 -
Phco10g00272 187 MobiDBLite consensus disorder prediction 142 179 - -
Phco10g00272 187 MobiDBLite consensus disorder prediction 141 187 - -
Phco10g00272 187 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 175 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00272 Phco-Chr10 2510517 2511822 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco10g00272 Response_reg 2.8e-19 CL0304