Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00262 ATGGAGGATAAATCAGAGAAGCAAGATGATAGCCACCCATCTCTCCTCCTCCTCCCTAATCATGGCACCATCAAGGAGGACAATTCTCCAAGGAAAGCCATTGGAGGTGGCAGTGATAGGCTGAAGAGGGATGAGTGGAGTGAAGGGGCTGTGTCAACCCTTCTTGAGGCCTATGAGGCCAAATGGGTCCTCAGAAATAGAGCCAAACTCAAGGGCCATGACTGGGAAGATGTTGCAAAACATGTCTCATCAAGAGCCAACTCCACCAAGTCACCAAAGACTCAGACTCAGTGCAAGAACAAGATTGAGTCCATGAAGAAAAGGTACAGATCAGAGTCTGCAACCACTGCTGATGCATCATCTTGGCCTTTGTACTCTCGCCTTGATCTTCTCCTGCGTGGCACAGGACCAATATCTTCACTTCCACCACCAACAGCAACACCAACAACAACAATAGCACCATCATTTCAACCACCACATGCCACCAATAATAACCAGGCTATGGTGCTGCTGGAGCCTCCTTTACTGGCTGCTTCACAACCTCCTCCTTCTGTTGCTCCTCCACCACTCACAATTGCACAAAACTCTCATGGATCCAATGGTGTTGAAAGACTAGCGAAGGAAGATGGGTTAGGAGGCAAATCATCTGAGCATGTATCTAACAAGAATCTAATGGACTCGGATAGTAGCACACCTGCTCTATACAGTGAAAAGGAGAAGGTGAGATGCAACAAGAGGAAGATGAAAAGTGAGAACAACAACAAGAGGGTGAGAAGGAAGAGTAATAGTAATAACAATAACCACAACAATGAAGACATGGACATAGCAGAAAGCATAAGGTGGCTAGCAGAAGTGGTGGTGAGATCAGAACAAACGAGAATGGACACAATGAAAGAAATTGAGAAGATGAGAGTTGAATCTGAGGCAAAGAGAGGGGAGATGGAGCTCAAGAGAACTGAAATCATAGCCAATACTCAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAAAGGTGTTGATTCTTCACTAAGAATTGGAAGAAGTTAA 1050 0.4524 MEDKSEKQDDSHPSLLLLPNHGTIKEDNSPRKAIGGGSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAKHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATTADASSWPLYSRLDLLLRGTGPISSLPPPTATPTTTIAPSFQPPHATNNNQAMVLLEPPLLAASQPPPSVAPPPLTIAQNSHGSNGVERLAKEDGLGGKSSEHVSNKNLMDSDSSTPALYSEKEKVRCNKRKMKSENNNKRVRRKSNSNNNNHNNEDMDIAESIRWLAEVVVRSEQTRMDTMKEIEKMRVESEAKRGEMELKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00262 349 MobiDBLite consensus disorder prediction 1 42 - -
Phco10g00262 349 Pfam Myb/SANT-like DNA-binding domain 43 130 IPR044822 -
Phco10g00262 349 MobiDBLite consensus disorder prediction 178 197 - -
Phco10g00262 349 Gene3D - 46 111 - -
Phco10g00262 349 MobiDBLite consensus disorder prediction 216 232 - -
Phco10g00262 349 MobiDBLite consensus disorder prediction 136 163 - -
Phco10g00262 349 FunFam Trihelix transcription factor ASIL2 46 111 - -
Phco10g00262 349 MobiDBLite consensus disorder prediction 203 272 - -
Phco10g00262 349 MobiDBLite consensus disorder prediction 25 42 - -
Phco10g00262 349 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 34 335 IPR044823 -
Phco10g00262 349 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00262 Phco-Chr10 2394187 2396236 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco10g00262 Myb_DNA-bind_4 8.3e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00262 10 2394187 2396236 Phco10g00262 10 2394187 2396236 ECH