Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00166 ATGAGGAAGAAGCTCGACACCCGTTTCCCCGCTGCACGAATAAAGAAGATAATGCAAGCAGATGAGGATGTCGGAAAGATAGCATTGGCAGTTCCTGTTTTAGTATCTAAAGCTCTGGAGTTATTTTTGCAAGATCTCTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATGCACTGCATTTGAAACATTGTGTACAAAGTTATAACGTCTTTGACTTTCTGAGAGACATTGTCAGCCGGGTTCCTGACTATGGGCATGGACATGGCCATTCTGAGGCTGGAGCTGATGATCGTGCCCTTTCAAAGAGAAGGAAAGCTGCTGGTGTTGAGGGCAATGAGAGTGATGAAGAGACCAAGAGGAGTAAGATGCGTGAGTTGGGCCACACCGGCACTCCTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGATTCGAGCTGTTGAAAGAGACATTGGTCATCAGCAGGTTGAATCTGAGCCTTGCTCCTCTATTCAACAAATTAGCAATGATATTCCTAACACAAGTCTGCCAATAGATAATGGTGTGCAATCCCAGGAGTCTTCAAAGGAGAACTTTGCAGCTCATGAGGAAAGTACTCAATCTTTCCGTAACATTGATCTGAATGCTATCTTAAACGAAAATGAAGACAAAAATGCTAGTGAAGCTGTTCAGGCTTCAGAGCCTGAGCTTGCTGACATGGACATTAAACATGAAGAAATTCCAGGCTGGTCCCTATCTGACGTCGACAAGATGGCCATTGACACTATGCAACTTGCAACCCTTGGTAGTAGACTAGAAGAGGATGATGAAGATTATGATGAGGAAGGGTAA 861 0.453 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHSEAGADDRALSKRRKAAGVEGNESDEETKRSKMRELGHTGTPGRGRGRGRGRGRGRGIRAVERDIGHQQVESEPCSSIQQISNDIPNTSLPIDNGVQSQESSKENFAAHEESTQSFRNIDLNAILNENEDKNASEAVQASEPELADMDIKHEEIPGWSLSDVDKMAIDTMQLATLGSRLEEDDEDYDEEG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00166 286 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Phco10g00166 286 MobiDBLite consensus disorder prediction 91 181 - -
Phco10g00166 286 SUPERFAMILY Histone-fold 4 98 IPR009072 GO:0046982
Phco10g00166 286 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Phco10g00166 286 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 118 - -
Phco10g00166 286 MobiDBLite consensus disorder prediction 91 137 - -
Phco10g00166 286 MobiDBLite consensus disorder prediction 166 181 - -
Phco10g00166 286 MobiDBLite consensus disorder prediction 151 165 - -
Phco10g00166 286 FunFam dr1-associated corepressor homolog 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00166 Phco-Chr10 1338430 1343768 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phco10g00166 CBFD_NFYB_HMF 1.3e-19 CL0012