Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00146 ATGATCTATCAATGGTTGTTCATCATCAAATTGGTGTACCTTGTTGTTTGCTTTGTTGCTGGTCAGAACATTAGCAACTCAACACCACTTGATTATAGATATGCTTGTTTGGACCAATCTTCTGTTCCTACCTCTACTGCTTACCAAACCAACCTCAACAATTTGTTCACTTCCCTCTCATCTGATTCTGCTACCAGCAATGGTTTTGGGAATAGAACTTCAGGTATTAATGAAGACATGGTTTATGGACTCTATTTTTGCCGTGGTGATGTGAACACCAGCTTTTGCCACTCATGTGTCCAAAGCTTAGGCATCTTGCTCATGCAGCACTGCCCCAACAATGCCTCAGCTGTTTTCTGGTACCCTATTTGTCTTCTGAGGTACTCAAACCAGAATTTCTTTGGCAACCTCACCATTCGGCCAAGGATTCCGATGTTTGATGCCACACAGAATTTTACTAGTGCTGGAGAATTTGACAGTGATGCTCAGGTTTTGATGAATGGTTTGATACAAATAGGGTCAGAGGCACCCTTGATGTTTGGGACGCATATGTTCAACATAAATGGCACTCAAAAAAGGTATGGTTGGGTGCAGTGCAGCAGAGATATTACATCTGAGGAATGCAGAACATGTTTGAGCAATATGCTTGAGGATGTTGAAAATTGTTGTCAGGAAAAGAAGGTGTGGCGTGTCTTTTCTCCAAGTTGTGTTGTGATGTATGAAACTCAGCCTTTCTTCTTGAATGGTAATGTTTCTGCGCCAGCACCTCAGCAAGATAATGCAGCCACAGATGGGAATAACAGAAGGTGGTGGTTCATAGTAATCATTGCCGTAGCTGGAATTGCTCTATTGGCTATCAGCATATACTACTGCTACTTGAAAAGGAAAAAAGACAAACAAAGTATAGAAGAGGAGAGACTAAATTCAATTTTTTCTCAAGAACAAACAGATAGGAAGGAGAATATGAACACTGACCTTCCTATGATGCCTCTGAGTACTATTCTAAAATGTACAAACAACTTTTCTGATGAACAAAAGCTGGGGGAAGGTGGATTTGGACCTGTCTATGAGGGTATATTACCAGATGGAAGACAAATTGCTGTTAAAAGGCTTTCAAAAACTTCAGTTCAAGGTGGTGAGGAATTCAAGAATGAAATAATATTGATTGCAAAATTGCAGCATCGCAACCTTGTGAGACTGTTGGCTGGCTGTCTTGAGCAAAATGAAAAGCTTCTAGTCTATGAATACATGCCAAATTCAAGCCTTGATTTCCACTTATTTGGTATGACTCCAAAACAATGA 1302 0.4032 MIYQWLFIIKLVYLVVCFVAGQNISNSTPLDYRYACLDQSSVPTSTAYQTNLNNLFTSLSSDSATSNGFGNRTSGINEDMVYGLYFCRGDVNTSFCHSCVQSLGILLMQHCPNNASAVFWYPICLLRYSNQNFFGNLTIRPRIPMFDATQNFTSAGEFDSDAQVLMNGLIQIGSEAPLMFGTHMFNINGTQKRYGWVQCSRDITSEECRTCLSNMLEDVENCCQEKKVWRVFSPSCVVMYETQPFFLNGNVSAPAPQQDNAATDGNNRRWWFIVIIAVAGIALLAISIYYCYLKRKKDKQSIEEERLNSIFSQEQTDRKENMNTDLPMMPLSTILKCTNNFSDEQKLGEGGFGPVYEGILPDGRQIAVKRLSKTSVQGGEEFKNEIILIAKLQHRNLVRLLAGCLEQNEKLLVYEYMPNSSLDFHLFGMTPKQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00146 433 ProSiteProfiles Protein kinase domain profile. 341 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00146 433 SUPERFAMILY Protein kinase-like (PK-like) 320 430 IPR011009 -
Phco10g00146 433 FunFam Cysteine-rich receptor-like protein kinase 10 143 245 - -
Phco10g00146 433 Gene3D Phosphorylase Kinase; domain 1 301 416 - -
Phco10g00146 433 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 159 427 - -
Phco10g00146 433 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 416 - -
Phco10g00146 433 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Phco10g00146 433 Pfam Protein kinase domain 342 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00146 433 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Phco10g00146 433 FunFam Cysteine-rich receptor-like protein kinase 28 32 132 - -
Phco10g00146 433 Gene3D - 30 133 IPR038408 -
Phco10g00146 433 Gene3D - 144 245 IPR038408 -
Phco10g00146 433 Pfam Salt stress response/antifungal 150 242 IPR002902 -
Phco10g00146 433 Pfam Salt stress response/antifungal 41 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00146 Phco-Chr10 1172202 1174149 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco10g00146 Stress-antifung 4e-12 No_clan