Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00145 ATGCTGATGATACACAGTGGTCATTGCAGCAAAAGAAGAATGATCTATCAATGGTTGTTCATCATCAAATTGGTGCACCTTGTTGTTTGCTTTGTTGCTGGTCAGAACAGTAGCAACTCACAGCCACTTGATTATAGATATGCTTGTTTGGACCAATCTTCTGTTCCTACCTCTACTGCTTACCAAACCAACATCAACAATTTGTTCACTTCTCTCTCATCTGATTCTGCTACCAGCAATGGTTTTGGGAATGGAACTTCAGGTATTGATCAAGACATGGTTTATGGACTCTACCTTTGCCGTGGTGATGTGAACACCAGCCTTTGCCACTCATGTGTCCAAAACTCTAGCATCTTGCTCATGCAGCACTGCCCCAACAATGCCTCAGCTGTTTTCTGGTACCCTTTTTGTCTTCTGAGGTACTCAAACCAGAATTTCTTTGGCAACCTCACCATTCGGCCAAGGATTCCTATGTTTGATGCCACGCAGAATTTTACTAGTGCTGGAGAATTTGACAGTGATGCCCAGGTTTTGATGAATGGTCTGATACAAATAGGGTCAGAGGCACCCTTGATGTTTGGGACACATATGTTCAACATAAATGGCACTCAAAGAAGGTATGGTTGGGTGCAGTGCAGTAGAGATATTACACCAGAAGAATGCAGAACATGTTTGAGCAATATGCTTGAGGATGTTGAAAATTGTTGTCAGGAGAAGAAGGTGTGGCGTGTCTTTTCTCCAAGTTGTATTGTGATGTATGAAACTCAGCCTTTCTTTTTGAATGGTACAGATTCTGCTCCAGCACCTCAGCAAGCCACAGATGGGAATAACAGAAGGTGGTGGTTTATAGTAATCATTGCTGTAGCTGGAATTGTAGCACTAGCTCTTTTGGTTATCAGCATATACTACTGCTACTTGAAAAGGAAAAAAGACAAACAAACTACACAAGAGGAGGGACTGAATTCAATTTTTTCTCAAGAACAAACAGACAGGGAGGAGAGTATGAATACTGACCTTCCTATGATGCCTCTGAGTACTATTCTAAAATGTACAAACAACTTTTCTGATGAACAAAAACTGGGGAAAGGTGGATTTGGACCTGTCTATAAGGGTACATTACCAGATGGAAGACAAATTGCTGTTAAAAGGCTTTCAAAAACCTCAGTTCAAGGTGGTGAGGAATTCAAGAATGAAATCATATTGATTGCGAAATTGCAGCATCGCAACCTTGTGAGACTGTTGGCTGGCTGCATTGAGCAAAATGAAAAGCTGTTAGTCTATGAATACATGCCAAATTCAAGCCTTGATTTCCACCTATTTGATATCAAGAAGGGTGCTCATCTGGATTGGAAAAACCGATTAAACATTATAAATGGGATTGCTAAAGGGGTTCTATATCTACATGAAGACTCAAGACTAAGGGTTATTCACAGAGACCTGAAAGCTAGCAACATTCTTCTAGATCATGAAATGAATCCCAAAATCTCAGACTTTGGATTGGCAAGAACATTCGGAGGAGACCAGAAGCAGGCAAACACAATTAGAGTTGTTGGAACTTATGGATACATGGCTCCAGAGTATGCTATGGAAGGTTTGTTTTCAGTGAAGTCAGACGTTTTCAGCTTTGGTGTTCTTTTGCTAGAGATCATCAGTGGAAGAAGGAACACTAAATTCTATCAGTCAGACCAAGGCCAAAGCCTTCTTATATATGCATGGAACCTCTGGTGTGAAAGCAAAGGGTTGGAATTGATGGATCCATCAATAGAAAAATCAAGTGTACACAGTGAAGTAGTAAAGTGTATGCACATTGGACTATTGTGTGTGCAAGAAGATGCAGCAGATAGACCAACAATGTCAAGTGTTGTTCATATGCTTGCAAGTGACACAATGAGTCTTGCCAGCCCCACACGCCCTGCATTTTCTGTTGGAAGAACAGTCATTGAACAAGAGTCTTCATCAAACACTTCTATGCATTACTCTGTCAATGAAGTAACAATGTCTGAAGTGATACCAAGGTGA 2019 0.4086 MLMIHSGHCSKRRMIYQWLFIIKLVHLVVCFVAGQNSSNSQPLDYRYACLDQSSVPTSTAYQTNINNLFTSLSSDSATSNGFGNGTSGIDQDMVYGLYLCRGDVNTSLCHSCVQNSSILLMQHCPNNASAVFWYPFCLLRYSNQNFFGNLTIRPRIPMFDATQNFTSAGEFDSDAQVLMNGLIQIGSEAPLMFGTHMFNINGTQRRYGWVQCSRDITPEECRTCLSNMLEDVENCCQEKKVWRVFSPSCIVMYETQPFFLNGTDSAPAPQQATDGNNRRWWFIVIIAVAGIVALALLVISIYYCYLKRKKDKQTTQEEGLNSIFSQEQTDREESMNTDLPMMPLSTILKCTNNFSDEQKLGKGGFGPVYKGTLPDGRQIAVKRLSKTSVQGGEEFKNEIILIAKLQHRNLVRLLAGCIEQNEKLLVYEYMPNSSLDFHLFDIKKGAHLDWKNRLNIINGIAKGVLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARTFGGDQKQANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGRRNTKFYQSDQGQSLLIYAWNLWCESKGLELMDPSIEKSSVHSEVVKCMHIGLLCVQEDAADRPTMSSVVHMLASDTMSLASPTRPAFSVGRTVIEQESSSNTSMHYSVNEVTMSEVIPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00145 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Phco10g00145 672 ProSiteProfiles Gnk2-homologous domain profile. 153 258 IPR002902 -
Phco10g00145 672 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 319 429 - -
Phco10g00145 672 Pfam Domain of unknown function (DUF3403) 627 672 IPR021820 GO:0004674
Phco10g00145 672 Gene3D Transferase(Phosphotransferase) domain 1 430 635 - -
Phco10g00145 672 Pfam Protein tyrosine and serine/threonine kinase 357 625 IPR001245 GO:0004672|GO:0006468
Phco10g00145 672 Pfam Salt stress response/antifungal 54 144 IPR002902 -
Phco10g00145 672 Pfam Salt stress response/antifungal 163 255 IPR002902 -
Phco10g00145 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 57 668 - -
Phco10g00145 672 SMART serkin_6 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00145 672 Gene3D Phosphorylase Kinase; domain 1 314 429 - -
Phco10g00145 672 FunFam Cysteine-rich receptor-like protein kinase 28 45 145 - -
Phco10g00145 672 SUPERFAMILY Protein kinase-like (PK-like) 337 656 IPR011009 -
Phco10g00145 672 CDD STKc_IRAK 360 625 - -
Phco10g00145 672 ProSiteProfiles Gnk2-homologous domain profile. 43 146 IPR002902 -
Phco10g00145 672 FunFam Liguleless narrow1 430 633 - -
Phco10g00145 672 FunFam Cysteine-rich receptor-like protein kinase 10 156 258 - -
Phco10g00145 672 ProSiteProfiles Protein kinase domain profile. 354 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00145 672 Gene3D - 157 258 IPR038408 -
Phco10g00145 672 Gene3D - 43 146 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00145 Phco-Chr10 1163717 1167409 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco10g00145 PK_Tyr_Ser-Thr 1.5e-47 CL0016