Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00138 ATGACTACAGAAACTCAGAGGGTAGTGGTGATCCAGGATGCATCAAGAGGTGTTAGTTCAAAGGCTATCCTTGGAGCCCTGGAAAAGTTTTCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATCCTTGATTGGATTAGCAGTCCCATGGGTTACATGGTCAGACTTGATACCAGCTCAATGATTTCAACGAACCAGAAAATAATTGCAAAATGGCATACCAAAAAAAAGAAAGAATATCTTATGAACGAGAAGATCAAGGAGATCTCCAACTACTGTAAATCGAATGAGATTGGATTCCAATTTGAAGTGCTTGTAGGCCCTACTGCAGAAGTTGCTTCTAATGCTGCCAAGGATTTTCAGGCGACAACTTTGATTTTATTTAGACAGATCCACAAAGATTTGAAGTATTTCATGCGCCAGCATCCTTGTGGCATGTATAGGATAACAAGTGACAATTCAATTGAGAGGTTGAAAGATCCAAAATCAACAGCCAGCAGCAAATCACTTGTCGAAAGGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAAGAACGTTCTCTTCAGATGTCCAGGTCTTCATCAAGTGATATGTTGACATCAATTGGAGTCTCAAGTCAGTGGAGTACAGAACTCTCCACTTCTAGTTGCAGAAGCTTGCGGTATGGCCAGCAATACCAAGAGGGAAATCTCTATTCAAATATAGAACAAGAAACAGCAGGGAACCAATCACTATTTCACATTTCAGAGAATGAAGAAACGAACCAATTGGAAGAAAATAAAAGAGAGAACTACGGTAGAAATAATGAAAAATCTCCTATGGAGGAAGAATTTGCAAATCCACTTTGTTCTGTGTGCAATAATCGACGACCAAAAGTTGGATTGAAGAGAGATTTCACTTATGCAGAGCTCTTTGCTGCTACAAAAGGATTTTCTCCCAAGAACTTTCTGTCAGAAGGAGGATTTGGATCTGTCTACAAAGGACTGCTTAATGGAATGAAGATTGCTGTTAAGCAACATAAAAATGCAGGCTTCCAAGGAGAGAAGGAATTTAAGTCAGAAGTGAATGTACTTAGCAAAGTCAGACATGAGAATGTGGTTGTGCTGCTAGGTTCATGCTCAGAAGGAACTAATAGGCTTCTTGTGTATGAATATGTTTGCAATGGCTCACTTGACCAACATCTATCAGAACACTCTCGGACACCTCTTAGTTGGGAAGATAGGATCAATATAGCAATAGGAGCTGCCAAAGGATTACTATACTTACACAAGAATAACATGATACACAGAGATGTGAGACCAAACAATATCCTCATAACACATGATCATCGACCATTGCTAGGAGACTTTGGATTAGCAAGAAATCAAAATGAAGACTCGATACACTCAACGGAAGTTGTTGGAACTTTGGGGTATTTGGCACCAGAATATGCTGAACATGGGAAAGTGTCCAGCAAAACAGATGTATACTCTTTTGGAGTGGTTTTACTACAGCTAATAACAGGAATGAGAACTACAGATAAAAGACTTGAAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAGAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTAAGTCTCATGATGTCCATCAACTATTTTGGATGGTTCGAATAGCGGAGAAATGTCTAAGCAGGGAGCCTCAAAGGAGACTAAATATGATTCAGGTTGTTGATGCTTTGACTGACATAGTGGAAGGCAGAACATGTGACATCATATTAAGAGATTACTCCCCTGCAAGATCAGATTCGATTTATACTGCATCAGGCTCTGATGAATCTGAAGATGAAATGAAGGAATCCTTCAACTTTGAAGATGAATTAATAGCTCGCAGCCATAGTTCAGAATCCATAGATAGTAATAGCATAAGTCTGATGATGCATATGAATTTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCCCTCTAAGTAACTCATGCTCGTATAAGTTTCGTGATGAGTCAACTAGTGATGGTGAAGCAATGGAAATTTCAAAATCCAATGAGGTTACTCAATTGTTAGATGCTAGGCTTAGTATATAG 2100 0.3919 MTTETQRVVVIQDASRGVSSKAILGALEKFSVKAGDQLIIVAILDWISSPMGYMVRLDTSSMISTNQKIIAKWHTKKKKEYLMNEKIKEISNYCKSNEIGFQFEVLVGPTAEVASNAAKDFQATTLILFRQIHKDLKYFMRQHPCGMYRITSDNSIERLKDPKSTASSKSLVERQENVSYKEMFPGSEEEERSLQMSRSSSSDMLTSIGVSSQWSTELSTSSCRSLRYGQQYQEGNLYSNIEQETAGNQSLFHISENEETNQLEENKRENYGRNNEKSPMEEEFANPLCSVCNNRRPKVGLKRDFTYAELFAATKGFSPKNFLSEGGFGSVYKGLLNGMKIAVKQHKNAGFQGEKEFKSEVNVLSKVRHENVVVLLGSCSEGTNRLLVYEYVCNGSLDQHLSEHSRTPLSWEDRINIAIGAAKGLLYLHKNNMIHRDVRPNNILITHDHRPLLGDFGLARNQNEDSIHSTEVVGTLGYLAPEYAEHGKVSSKTDVYSFGVVLLQLITGMRTTDKRLEGRSLVGWARPLLRERNYPDLIDERIIKSHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDIILRDYSPARSDSIYTASGSDESEDEMKESFNFEDELIARSHSSESIDSNSISLMMHMNLRQPPSPPIQSIPLSNSCSYKFRDESTSDGEAMEISKSNEVTQLLDARLSI 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00138 699 Gene3D Transferase(Phosphotransferase) domain 1 392 592 - -
Phco10g00138 699 ProSiteProfiles Protein kinase domain profile. 317 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00138 699 Gene3D Phosphorylase Kinase; domain 1 290 391 - -
Phco10g00138 699 PANTHER OS01G0253100 PROTEIN 196 583 - -
Phco10g00138 699 FunFam Proline-rich receptor-like protein kinase PERK8 279 391 - -
Phco10g00138 699 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 392 594 - -
Phco10g00138 699 SMART tyrkin_6 317 579 IPR020635 GO:0004713|GO:0006468
Phco10g00138 699 Pfam Protein tyrosine and serine/threonine kinase 322 578 IPR001245 GO:0004672|GO:0006468
Phco10g00138 699 SUPERFAMILY Protein kinase-like (PK-like) 303 587 IPR011009 -
Phco10g00138 699 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00138 Phco-Chr10 1091551 1096390 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco10g00138 PK_Tyr_Ser-Thr 1.3e-47 CL0016