Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00137 ATGTCTAATCCACACACACAAGTTGAACAAGAAAAACAGCACATGAGCAACCATGAAACACACCAAAAGGTTGCACAATCTGTTTGCTCAGTGTGCTATAACAGAAGACCACAGTTTGAAAGGAACAGAAAAAGAGAGTTTTCATATGCTGAGTTGTATGCAGCCACACAAGGTTTTTCCCCTAAGAACTTTCTGTCAGAAGGGGGGTTTGGTTCTGTCTATAAAGGGGAGTTGTGTGGAGAGAAGATTGCTGTTAAGCAACACATGTGTGCAAACCGAAAAGGAGAAAAGGAATTCAAGTCTGAAGTTGATGCACTCAGCAAAGCAATACATGAGAATGTGGTCAAGCTGTTAGGATCATGCTCAGAAGGGAACCATAGACTTCTTGTGTATGAATATGTCTGCAATGGTTCATTAGACCAACATTTATCACAACATTCTCGTAAACTTCTTAATTGGCAAGACAGGGTGAAAGTAGCTGATGGAGCTGCCAAAGGATTGCTATACCTGCATGAGAATAACATAATACACAGAGATATGACAACAAACAACATTCTTCTTACCCATGATTATGATGTATTGCTAGGGGATTTTGGTTTGGCAAGAACTGTTATTGAAGACTCCTCATACTCTACAGAGTGTGTTGGGAATCTGACTTATATGGCACCAGAATATGCAGAATTTGGAAAAGTGTCAATTAAGACTGATGTGTATTCCTTTGGGGTGGTTCTACTGCAGCTAATAACTGGAATGAGGACCACAGACAAACGAGTTGCTGATAAAGGTCTGGTGGGATGGGCTAGACCACTACTGAAGGAAGGAAAATGCCAAGCCCTTATTGATGGGAGAATGATCAACTCCCATGATTGCCATCAACTCTATTGGATGAGCCGTTTAGCTGGAAATTGTCTTCAGAGGGATCCTCAAAAGAGATTGCATATGAGTACAGTTGTGAAGGCCTTAAATCAGATAGGCAAAGGTTGTAGCTGCATTGTGAGAAAGGATCATACCCTTCTAATCTCAAGCTCTTCTACCTCAAAAGATCATACAGAGTATTCCTCACAGTCACAAGAGTGGTCAGAATCACAAGAGTGGAAGTTAAAGTATACATTGTAG 1116 0.4086 MSNPHTQVEQEKQHMSNHETHQKVAQSVCSVCYNRRPQFERNRKREFSYAELYAATQGFSPKNFLSEGGFGSVYKGELCGEKIAVKQHMCANRKGEKEFKSEVDALSKAIHENVVKLLGSCSEGNHRLLVYEYVCNGSLDQHLSQHSRKLLNWQDRVKVADGAAKGLLYLHENNIIHRDMTTNNILLTHDYDVLLGDFGLARTVIEDSSYSTECVGNLTYMAPEYAEFGKVSIKTDVYSFGVVLLQLITGMRTTDKRVADKGLVGWARPLLKEGKCQALIDGRMINSHDCHQLYWMSRLAGNCLQRDPQKRLHMSTVVKALNQIGKGCSCIVRKDHTLLISSSSTSKDHTEYSSQSQEWSESQEWKLKYTL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00137 371 Gene3D Phosphorylase Kinase; domain 1 15 133 - -
Phco10g00137 371 ProSiteProfiles Protein kinase domain profile. 59 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00137 371 MobiDBLite consensus disorder prediction 1 21 - -
Phco10g00137 371 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 134 336 - -
Phco10g00137 371 FunFam Proline-rich receptor-like protein kinase PERK8 19 133 - -
Phco10g00137 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 358 - -
Phco10g00137 371 SUPERFAMILY Protein kinase-like (PK-like) 45 329 IPR011009 -
Phco10g00137 371 Pfam Protein tyrosine and serine/threonine kinase 63 321 IPR001245 GO:0004672|GO:0006468
Phco10g00137 371 ProSitePatterns Tyrosine protein kinases specific active-site signature. 175 187 IPR008266 GO:0004672|GO:0006468
Phco10g00137 371 Gene3D Transferase(Phosphotransferase) domain 1 134 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00137 Phco-Chr10 1085738 1088751 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco10g00137 PK_Tyr_Ser-Thr 2.1e-50 CL0016