Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00128 ATGGATTCTATGGATGATGACAAGATGAGGGGTGTTGATACTGGTGCTAAGTATGATGCTGTTCTTTTCTCTGATGACCCTTCAACGAGAAACGTTGAAGAAGAGACGATGAGGGTGGGAGAAGAGAGTGAAGAAGATGAAGAAGAAGTGGTGACAGTGGAGGAACTGGAGACAAGGATGTGGAGAGATCGCATCATGTTGAGGAAGCTTAAGGAGGAGAAGAGGGATAAGGAGAAAGGAGAAACATTGGAGATGATGAAGAAGAAGGCATTGATTCGTGCACAAGACACAGTGCTGAAGAACATGGTGAAGATGATGGAGATTTGTGGTGTTCGTGGCTTCGTTTATGGCATCATTCCTGAGAAGGGAAAACCAGTGAGTGGAGCTTCTGATAACCTAAGAGGTTGGTGGAAGGATAGGGTCAAGTTTGATCATAATGGTCCTGCTGCTATGCTCAGGTATGAGGAAGAAAGTGGGTTTGAAGAGATGGTTGGTGATGCATTCAATGGAGAGCCACCAACAGCATACAGTTTGAGTGATCTCCCAGACACAACTCTTGGCTCACTCTTGTCATGTCTCATGCAGAACTGTGAGCCTCCCCAGAGGAGGTACCCTTTGGACAAGGGCATTGCCCCTCCCTGGTGGCCCACTGGGCAGGAGTGGTGGTGGGCCCAGATGGGCTTTTCCATGGACCCAGGCCCACCTCCCTACAAGAAGCCCCATGACCTCAAGAAGGTGTGGAAGATTTGTGTGCTCACTGCAGTTATCAAGCACATATCCCCAGACATAGCAAAGATCAGAAATATTGTGCGTCACTCTAGGACCCTTCAGGACAAGCTCACTGCTAAAGAAACTGCCATTTGGAGTGCTATTGTGAAGCGTGAAGAGTCCTTTGCTAGGAGATCATACCCTCATTTCTTCCATCATACCCTCCCACTAAGACCACCACCAATTGGCTATGATAGTCTTACAAATTTTCTTGGGGGGCAACAAAGCAACCTTGGTGCAGCAATGAATCTTCTTGGAGGACTCAATAACATACCACAACCCAACAATGTTGCTAATGGTGGTGCTTGGAGCTTTCTTGGTGGCCATAATAACCCTTCAACTACCACCAATGCTGCTAGAATTCTTCTTGGGAGCCAAAGTAACCCTTCACCAACCACTGATTTGACTGCTGATGGTGCTACAAGTTTTCCTGGAGGGAGGATTAATACAGCACCAGCAACCAATGTAGCCAATGGTGGAGCTAGAAATTTCTTTGTGGGCCAGTTCAATCCACCAACACCAACACCAACGAGTGGACTCATGAGAGCTTTTCTGGAGGGCCAATGTAACCCACCACCACCAACAAGCAATGTTGCCATAGGTAATGGCAATAACAATAACATGGTTACAATGATGAACAGTGGCATTGTTATGCCACTAGACCATGCTGGTGAAAAGAGAAAGGGTGGGGATGTTCAAGGTATTACATTTCCTCATGAGGCTTATTCTTGCCATAGCACCGAGTGCCCTTATCATGAGACTGGCTTTGGGTTCAGTGACAGGAACACGAGGAACAATCATCAGCTGACATGCCAATACAGAAGCAAAAATCCTTTGCAAGTGGTTGGAGTTGGAGGGTTAATGTCTTCTCAACTTGGAAGTGACAGGAACATTACCGCATCAGTTACTAATCAAAATCAGACTTTCATTGTTGCAGACAAGGGGTGTGGTGTGATGCACAACATGAATGTTCAGCAGAAGCAATCCACAGGTGTTGGAAGTAGCATGAATGTTCCTCCTCTTGCAGGCCAAAACCAGCATGTGCAAAGTGTTCAGACTGAGGAGTACAATAATAGTTTGTTTGATGGAAGGTTTTCTTCGGACAAGGATATCTTTGGCAACAACATGTATGTGCCTTCTCTAGCAAGCAAAACCCAGCAGCAGGTGCAAAATGTTGGTGGTAGCAATGGCCACAGTTTGAATGGCAATTTGTCAACATCGATAATAGTAGATTCCCCCGTTGCATGGGATGCAAACAATTCCCAAGCTGAATTTTTGGACTCTCCTTTGTTGATGACACCGGATCAGGATCTTCTTTGGTCATAA 2094 0.4604 MDSMDDDKMRGVDTGAKYDAVLFSDDPSTRNVEEETMRVGEESEEDEEEVVTVEELETRMWRDRIMLRKLKEEKRDKEKGETLEMMKKKALIRAQDTVLKNMVKMMEICGVRGFVYGIIPEKGKPVSGASDNLRGWWKDRVKFDHNGPAAMLRYEEESGFEEMVGDAFNGEPPTAYSLSDLPDTTLGSLLSCLMQNCEPPQRRYPLDKGIAPPWWPTGQEWWWAQMGFSMDPGPPPYKKPHDLKKVWKICVLTAVIKHISPDIAKIRNIVRHSRTLQDKLTAKETAIWSAIVKREESFARRSYPHFFHHTLPLRPPPIGYDSLTNFLGGQQSNLGAAMNLLGGLNNIPQPNNVANGGAWSFLGGHNNPSTTTNAARILLGSQSNPSPTTDLTADGATSFPGGRINTAPATNVANGGARNFFVGQFNPPTPTPTSGLMRAFLEGQCNPPPPTSNVAIGNGNNNNMVTMMNSGIVMPLDHAGEKRKGGDVQGITFPHEAYSCHSTECPYHETGFGFSDRNTRNNHQLTCQYRSKNPLQVVGVGGLMSSQLGSDRNITASVTNQNQTFIVADKGCGVMHNMNVQQKQSTGVGSSMNVPPLAGQNQHVQSVQTEEYNNSLFDGRFSSDKDIFGNNMYVPSLASKTQQQVQNVGGSNGHSLNGNLSTSIIVDSPVAWDANNSQAEFLDSPLLMTPDQDLLWS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00128 697 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 32 307 IPR006957 GO:0003700|GO:0005634
Phco10g00128 697 MobiDBLite consensus disorder prediction 19 51 - -
Phco10g00128 697 SUPERFAMILY DNA-binding domain of EIN3-like 176 299 IPR023278 GO:0003700|GO:0005634
Phco10g00128 697 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Phco10g00128 697 Coils Coil 53 73 - -
Phco10g00128 697 Pfam Ethylene insensitive 3 54 296 IPR047091 GO:0003700
Phco10g00128 697 Gene3D - 81 156 IPR023278 GO:0003700|GO:0005634
Phco10g00128 697 FunFam Ethylene insensitive 3-like 1 169 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00128 Phco-Chr10 1019120 1022126 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Phco10g00128 EIN3 9.1e-104 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00128 10 1019120 1022126 Phco10g00128 10 1019120 1022126 ECH
Phco11g02358 11 26264996 26266858 Phco10g00128 10 1019120 1022126 ECH