Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00092 ATGGACAGGATTCTGGATGCAGATGGAAATATTGTATCTCAGCGTTCCTCTTCTTCTTCAGTTGTTGCTTTGGCAATCAAGGGTAACAAGAAAAGCAAATATGTGGTACAGTGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTATCTTCAAGCTGATACATGTTCATGCTAGTATACAAGGAGTTCCAACGCCAATGGGAAATGTGATCCCTCTTTCACAAGTGCGTAATGATGTAGCAACTGCATTCAGAAAGGAAGTGGATTGGCAAACAAACCAAATGCTGCTACCTTTCAAGAGATTGTGTGAGCAAAGAAAGGTGCATGTGGATGTTGTAGTGATTGAATCAGATGATGTGGCTATTGCAGTAGCAGAGGAAGTGGCTAAGGGTGCTATAACCAAACTTGTTGTTGGAGCTTCATCTCGTGGCTTATTTAAAAGTAAACAGAAGGGTATGTCTATGAAAATATCAGTAAGCACTCCAAGATTTTGCACAGTTTATGCTATTTCGAAGGGAAAATTGTCCATACGACAGTCCGACATGCCGATTGATGAAAGCATTATGGATGATGCTAGTGAAACCAGTTTGTCTTCCAGCAGCTCATCTAACTACACTTCCACCTCTCAGACAGAGTCTACCTCAGTTTCATCATATGCTGGTTTACACTCGTCTTCCCTAGCAACCCAACGATTTCAAGCTCTTTCAAGTATAAATAGTGCCCTTCTAAGCACAAATCCAAGTTTATCTGACACTAGTCATTCTAGAGGCCAATCTCTAGATCTTGGGAGAGAAAATACTGCTACCAGCTCTGCAAGAAACTCAGACATTGATCATGCCATAAGCCGTATCTCTAGTTGCAAAAGCTTTATTTCAGATACTGAATCTTGGATGTATGATCAAAATTCTATCAAGGATGTGGCACCAGCAACTACATTTCCATCTCCTAATATGCAGGCAAAATTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAAGTGAGAAAATTGAAGCATGCCGGAAGCTGAATGACCTTAGCAAGAGACGGTCAGAAGAAACCATGAAAATGAAGGAGATTGTTGCTAAGGAGGAGAAGGCAAAGGAATTAGCAAAACTAGAAACTGAGAAATATCAGGATGCATCCAGAGAAGCTGTATATTTGAAAGAATGTGCTGAAAGAGAGGCTGCAGAAAGGAAAGAAACAGAGTTGAAAGTCATCCGTGCTACAAAAGAGAAAGAAAAATTGGTGGATGCTCTAACTGGTACAGTGTTGCAGTACCGGAAGTTTACATGGGATGAAATAGTCTCAGCTACTTCATCTTTTTCTGAAGATCTGAGAATTGGAATGGGAGCATATGGAACAGTGTACAAGTGCAATTTGTATCACACAACTGTTGCTGTTAAAGTTCTCAACACTAATGGAAATCGTGAAAGCAAGCAATTCCAACAGGAGTTAGAGATATTGAGTAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCATGATCATGGATGTCTTGTATATGAATATATGGAGAATGGTAACCTGGAGGACAGACTGCTGAGGAAAAACAACACTTCCCCAATCACATGGTTTGAGAGATTCCGAATAGCTTGGGAAATTGCATCAGCTCTCGCCTTCCTTCACAGCTCAAATCCAGAACCTATTATTCATCGTGACTTAAAACCAGCAAACATCTTGCTTGGTCGTAACCTTGTCAGCAAGATTGGTGACATTGGACTTTCTACAGTACTCCATTCCGATAATTTATCTACCATGTACAAGGACACAGCACCTGTTGGGACACTCTGCTACATTGATCCTGAGTACCAAAGGACAGGGTTAATATCTCCAAAGTCTGATGTTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCAATAGCACTTGCTCATAAAGTTGAAATTGCAATTGAAGGTGGGAATTTGACAGATATATTGGATCCAGAGGCAGGGGCTTGGCCGTTTAAAGAGACACTAGATTTGGCCTTGTTAGGACTGAGCTGTGCAGAACTTCGACGTAGAGACCGGCCTGATTTAAAAGATCAAGTGCTTCCAACACTTGAGAGATTGAAAGAAGTTGCTGATAGGGCCCAACATTCTGCTTCAACTGTTACTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATTCTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCTGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGCTTCAAGAGAATGACAATTCACCAATGACAAACATGGCTTTACCTCACAAGCATTTAATTCCTAATTACACACTTTTGTCAGCAATTTTGGAGTGGAAGTCCAGAGAATCATGA 2424 0.4068 MDRILDADGNIVSQRSSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHASIQGVPTPMGNVIPLSQVRNDVATAFRKEVDWQTNQMLLPFKRLCEQRKVHVDVVVIESDDVAIAVAEEVAKGAITKLVVGASSRGLFKSKQKGMSMKISVSTPRFCTVYAISKGKLSIRQSDMPIDESIMDDASETSLSSSSSSNYTSTSQTESTSVSSYAGLHSSSLATQRFQALSSINSALLSTNPSLSDTSHSRGQSLDLGRENTATSSARNSDIDHAISRISSCKSFISDTESWMYDQNSIKDVAPATTFPSPNMQAKFNLELEKLRIELRHAQGLHAVAQSEKIEACRKLNDLSKRRSEETMKMKEIVAKEEKAKELAKLETEKYQDASREAVYLKECAEREAAERKETELKVIRATKEKEKLVDALTGTVLQYRKFTWDEIVSATSSFSEDLRIGMGAYGTVYKCNLYHTTVAVKVLNTNGNRESKQFQQELEILSRIRHPNLLLLLGACHDHGCLVYEYMENGNLEDRLLRKNNTSPITWFERFRIAWEIASALAFLHSSNPEPIIHRDLKPANILLGRNLVSKIGDIGLSTVLHSDNLSTMYKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVEIAIEGGNLTDILDPEAGAWPFKETLDLALLGLSCAELRRRDRPDLKDQVLPTLERLKEVADRAQHSASTVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLQENDNSPMTNMALPHKHLIPNYTLLSAILEWKSRES 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00092 807 Coils Coil 375 395 - -
Phco10g00092 807 PANTHER OS02G0152300 PROTEIN 21 801 - -
Phco10g00092 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Phco10g00092 807 MobiDBLite consensus disorder prediction 246 274 - -
Phco10g00092 807 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 737 807 IPR013083 -
Phco10g00092 807 Gene3D Transferase(Phosphotransferase) domain 1 526 736 - -
Phco10g00092 807 Coils Coil 326 346 - -
Phco10g00092 807 Coils Coil 403 423 - -
Phco10g00092 807 Gene3D HUPs 11 154 IPR014729 -
Phco10g00092 807 ProSiteProfiles U-box domain profile. 736 807 IPR003613 GO:0004842|GO:0016567
Phco10g00092 807 SMART Ubox_2 740 802 IPR003613 GO:0004842|GO:0016567
Phco10g00092 807 MobiDBLite consensus disorder prediction 191 210 - -
Phco10g00092 807 Pfam U-box domain 738 805 IPR003613 GO:0004842|GO:0016567
Phco10g00092 807 CDD RING-Ubox_WDSUB1-like 738 792 - -
Phco10g00092 807 SUPERFAMILY RING/U-box 735 805 - -
Phco10g00092 807 SUPERFAMILY Protein kinase-like (PK-like) 435 707 IPR011009 -
Phco10g00092 807 ProSiteProfiles Protein kinase domain profile. 453 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00092 807 Pfam Protein kinase domain 456 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00092 807 CDD STK_N 23 173 - -
Phco10g00092 807 Gene3D Phosphorylase Kinase; domain 1 437 525 - -
Phco10g00092 807 ProSitePatterns Protein kinases ATP-binding region signature. 459 480 IPR017441 GO:0005524
Phco10g00092 807 SMART serkin_6 453 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00092 Phco-Chr10 774658 782895 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco10g00092 PK_Tyr_Ser-Thr 8.6e-41 CL0016