Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00070 ATGCGCGACCTCGTTTCCGGAGCTGCCGCTTGCGGCGACTCTTCTTCTTCCTCCGCTAATCCTCTCGCTTCTCTAGCCAACGCCCTTGTTGGCTCTTCCTCCAAAACTCAGGAGAGGCTGAAGGAGATTCCGACGTCCACTCCCACTGACCCTACCTCGCAATTTTACTCCACCGCTCTCCCCGTCAATCACCTTCCCGGCTCCGAATTCGACAAGCCTCTATTGGATGCAAACTCTCAGGCTTCGGAGTTTTTGCATAGGTTCCGTGGCGCGAGTGGGCTCGAGGAGACGTGGGATGAGATACAGCGCGAGACCGGGGTTGCCGGACCGCGGCAACTGGTGCCGGCGATTCAGCAGCCGCCGTTGGATGGGACACCACAAAGAGTTCTATCGACTTTTTTGCACTCATTTCTTGACAGCAGCCGTGGTGGAGTGCCTTTTCATCCGACCCCTCTTCCGATGCTGGGTTTATCTGAAGGTGATAAACAATGCATACGGGACCGCAGCAGCATAATGGCCAGGCATCTCTTTGCAGATAAAAGTGAAGAATTTATTGATGCCCAAGTAAATGCCCTTCTATGCTCTCTAGATATTGATAGCAATGTCCGTGGTAAGGGACCTATGCCTGAAAGATTTCGGGAGCTGGAGGACTACTGGAATGAGTCTCAAGGCAATATGAGACCTGGTCCTCCTGCTCCAGACGGGTGGATTACTGAATTTAGTCAACATAGGGGAAAATATGATAATCCTGATTCATGGGCCAACTCCTTTGAGCAACAACATGGTGCGAATGGTTGGGTGTCTGAATTTGAACATTCCCAATTGTCATCAGTAGGTCAAATGCAAGGTATGAACGTGTCAAACTTTGCTGCAATGGAACAGACTCGTATGCTTGCAAATACATTGGCCCAAAATGGTGACCCTAAATTTCAGAACTCAAAATTCCTTCAATTTGTGTCAAAGATGAGCCGTGGTGAGTTGATTATTGATGACAACCAGGTTAAAGAGAATGCCTTGCCTGCGTCTGGAAATTGGGCTACAGAATATGATCAGCAATATAATGGTGGCCATGCATGGGCTGGAGAATTTTTAAATGATAAGGTTTATCATGGACCTGATCAGTGGGTGAATGAATATACAACTGAAGGACGGCAGCATGATGCAGCTGATGATCAGTGGGTTAATGAATTTTCAAAGTTGAATGTTAATGATTGGGCAGATGAATTTGGTCAGCAGTTCGGTGAAGCAGCCTTAGGAGACAGCACTTCTGATAGTTGGGCACAGGCATATGATGAGTTCTTAAATGAGCAAGTTGCTTCCAAGCAGCAGTTAGACAGTTCGAGGGGTGAGTATGTCTTTTCAGATTTAAACCCTTATGTTGGTCATCCAAATCCCCTAAAAGAAGGTCAAGATCTATTCAGAAAAGGACTCTTAAGTGAAGCAGTTCTAGCATTGGAAGCAGAAGTCCTAAAAAATCCTGAGAATGCTGAAGGGTGGAGACTGCTTGGAATAGCACATGCAGAGAATGATGATGACCAACAGGCTATTGCAGCAATGATGCGTGCACAGAAGGCTGACCCAACAAACTTGGAAGTGCTTCTTGCTCTTGGTGTTAGTCATACGAATGAACTAGAGCAATCAGCTGCTCTGAAGTATCTATATGGATGGTTGCGCCATCACCCAAAATATGGAACACTTGCCTCACCTGAGATGTCCGATTCTTTGTACTATGCTGATGTTGCTAGGTTATTCAATGAAGCTGCTGAACTATCTCCGGATGATGCAGATGTCCACATAGTTCTTGGGGTTATGTATAACTTATCCAGAGAATATGACAAAGCTATTGCATCTTTTGAAAGAGCACTGAAACTTAAGCCCCAGGATTACTCATTATGGAACAAACTGGGTGCTACACAAGCAAATAGTATTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCACTAGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAACCAGGGTATGTACGACGACTCCATTCGATATTATGTTAGAGCACTTGCCATGAATCCAAAAGCAGAGAATGCATGGCAATATTTGAGAATTTCATTGAGTTGTGCTTCTAGGAATGACATGTTGGAAGCTTGTGATAGTCGTAATTTGGACCTTCTCCAAAAGGAGTTTCCACTACAGTAG 2205 0.4531 MRDLVSGAAACGDSSSSSANPLASLANALVGSSSKTQERLKEIPTSTPTDPTSQFYSTALPVNHLPGSEFDKPLLDANSQASEFLHRFRGASGLEETWDEIQRETGVAGPRQLVPAIQQPPLDGTPQRVLSTFLHSFLDSSRGGVPFHPTPLPMLGLSEGDKQCIRDRSSIMARHLFADKSEEFIDAQVNALLCSLDIDSNVRGKGPMPERFRELEDYWNESQGNMRPGPPAPDGWITEFSQHRGKYDNPDSWANSFEQQHGANGWVSEFEHSQLSSVGQMQGMNVSNFAAMEQTRMLANTLAQNGDPKFQNSKFLQFVSKMSRGELIIDDNQVKENALPASGNWATEYDQQYNGGHAWAGEFLNDKVYHGPDQWVNEYTTEGRQHDAADDQWVNEFSKLNVNDWADEFGQQFGEAALGDSTSDSWAQAYDEFLNEQVASKQQLDSSRGEYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQKADPTNLEVLLALGVSHTNELEQSAALKYLYGWLRHHPKYGTLASPEMSDSLYYADVARLFNEAAELSPDDADVHIVLGVMYNLSREYDKAIASFERALKLKPQDYSLWNKLGATQANSIQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDDSIRYYVRALAMNPKAENAWQYLRISLSCASRNDMLEACDSRNLDLLQKEFPLQ 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00070 734 SUPERFAMILY TPR-like 447 733 IPR011990 GO:0005515
Phco10g00070 734 PANTHER PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 1 731 IPR024111 -
Phco10g00070 734 Pfam Tetratricopeptide repeat 466 528 - -
Phco10g00070 734 FunFam Peroxisome biogenesis protein 5 445 733 - -
Phco10g00070 734 Pfam Tetratricopeptide repeat 664 695 IPR001440 GO:0005515
Phco10g00070 734 Pfam Tetratricopeptide repeat 595 628 IPR001440 GO:0005515
Phco10g00070 734 ProSiteProfiles TPR repeat region circular profile. 595 628 - -
Phco10g00070 734 ProSiteProfiles TPR repeat profile. 629 662 IPR019734 GO:0005515
Phco10g00070 734 ProSiteProfiles TPR repeat profile. 496 529 IPR019734 GO:0005515
Phco10g00070 734 ProSiteProfiles TPR repeat region circular profile. 663 695 - -
Phco10g00070 734 MobiDBLite consensus disorder prediction 31 54 - -
Phco10g00070 734 ProSiteProfiles TPR repeat profile. 663 696 IPR019734 GO:0005515
Phco10g00070 734 ProSiteProfiles TPR repeat profile. 595 628 IPR019734 GO:0005515
Phco10g00070 734 Gene3D Tetratricopeptide repeat domain 443 734 IPR011990 GO:0005515
Phco10g00070 734 SMART tpr_5 595 628 IPR019734 GO:0005515
Phco10g00070 734 SMART tpr_5 663 696 IPR019734 GO:0005515
Phco10g00070 734 SMART tpr_5 629 662 IPR019734 GO:0005515
Phco10g00070 734 SMART tpr_5 496 529 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00070 10 576635 587981 Phco10g00070 10 576635 587981 ECH