Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00063 ATGGCTGGGATTGATGATAATGTTGCCCTTACTGGCGATTGGGGTCTTGCTAGCCCAAGTCCAAGAACATTTTTCTCTAGAATGTTGGAGGAAGATCATGTAACAAGATCAGTCTCAGAACATTCTGGAAGTGGTAGAACTGGGGAATTCTTTTCAGGACCTCATGAGCCTAGTGAGACCGGGAAGAAAAACATGCAGGATGGAGCACAAGATGGTGATTCTGGACCCCAATTGACTGACCCGAGTTTTCAGACAGAGCAAAAGTCGAACTCCAGGGGTGGTCTTGTGGAAAGAATGGCTGCTAGAGCTGGGTTCAATGCTCCTAGGTTGAACACTGAAAGCATTAGAACTACTGACCTTTCACTCAATTCTGACATTCACTCTCCTTACTTGACCATCCCACCAGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTCTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACTGGTAAGTTTCTGTTTATGTCAAATGGCAACATGCGGCACATGGAATTATCATCTGATGCTCCAGAAAAATGCAAAGATAATGGCTTTGATGATATTTATGCATCATCCTTTGCTTTCAAGCCAGCAACAGACTCAGGCTCCTCTTTCTATCATGGTGCTGGAAGAAAAATAAATCCAACTACAGTTCCTCAACAATCACGTCATGGTATTGAGGTTTCAGCTCAGTCAGAAAATTCCTTTCATTCTCAAAGTGTTGATGCTGTTAAAGTTCAAACTGAGAACAGAAGTGGTCTTCATCTTCAGGCAGACTTTGTTGAATCACCTCCTGAAAAAGATATTAAAATGTTTGCAGCTGATCAAAGGGCTTTTGATGGCATTGAACATTCTACTCCAGTTGAAGAGCATGGAGATGAAGAAGGAGATCAAAGAGGCAATGGAGATTCAGTGACTGGTGGTGTTGGGGGCACACCATCTGATGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAAGGCAGCGAGTACCCTCGAAGTTACTACAAGTGCACACATCCAAACTGTCAGGTTAAGAAGAAAGTAGAACGATCTCATGAGGGCCATATAACTGAGATCATCTACAAGGGAACGCACAACCATCCAAAACCTCCTCCAAATCGTCGGTCAGGTATAGGTTCAGTCAACCCTCACACTGAAATGCAAGTGGACAACCCTGAACATGTTGAATCACACAATGGTGGTGAGGGCGACATGGATTGGGGTAATGTACAAAAGGGAAATGTTGCTGGAGCTGCTAACTGGAAGCACGAAAACCTTGAAGCAACATCATCGGCATCTATTGGACCCGAGTACTGCAACCAGTCCACCAATTTGCAGAGTCAAAATGCTGGTACTCTCATTGATTCAGGAGAGGCAGTTGATGCCTCGTCTACTTTTTCTAACGAAGAAGATGAAGAAGACCGAGGCACACATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAGTCTAAGAGAAGGAAACTGGAATCATATGCAGACCTGAGTGGAGCTACTAGAGCCATCCGCGAGCCTAGAGTCGTTGTACAGACTACCAGTGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGAAAGTATGGACAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACAAATGCAGGCTGCACTGTAAGGAAACATGTGGAGAGAGCATCACATGACCTTAAATCCGTGATCACTACTTATGAAGGAAAGCACAACCATGATGTTCCTGCTGCTCGTGCCAGCAGCCATGTTAATGCTAACGCTTCCAGTGCTGGCCAAGCTTCTGGTGTTCTTCACACCCATGTTCACAGACCTGAACCATCTCAAGTACACAATGGCATGGGAAGGCTCGAGAGGCCATCCCTCAGCTCATTCAACCTACCCGGAAGGCAGCAGCTAGGACATTCCCATGGTTTCTCCTTCGGCATGAACCAATCCATGCTATCAAATCTGGCAATGTCAGGGTTAGGCCACATGCAAGCCAAGCTCCCTGTTATGCCTGTTCATCCATTCTTGGCACAACAACAACAGCAGCAGCAACAGCAAAGTCCTTCAAACGATTTTGGTTTCATGATGCCAAAGGGAGAGCCAAATGTGGAGGGTATTCCTGAACGTGGTGGTGGCCTTAACCTGCCAAATGGCTCATCAGTGTACCAAGAAATCATGAGTCGCATGCCCCTTGGACCTCACATGTAA 2253 0.4549 MAGIDDNVALTGDWGLASPSPRTFFSRMLEEDHVTRSVSEHSGSGRTGEFFSGPHEPSETGKKNMQDGAQDGDSGPQLTDPSFQTEQKSNSRGGLVERMAARAGFNAPRLNTESIRTTDLSLNSDIHSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRHMELSSDAPEKCKDNGFDDIYASSFAFKPATDSGSSFYHGAGRKINPTTVPQQSRHGIEVSAQSENSFHSQSVDAVKVQTENRSGLHLQADFVESPPEKDIKMFAADQRAFDGIEHSTPVEEHGDEEGDQRGNGDSVTGGVGGTPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHPKPPPNRRSGIGSVNPHTEMQVDNPEHVESHNGGEGDMDWGNVQKGNVAGAANWKHENLEATSSASIGPEYCNQSTNLQSQNAGTLIDSGEAVDASSTFSNEEDEEDRGTHGSVSLGYDGEGDESESKRRKLESYADLSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASSAGQASGVLHTHVHRPEPSQVHNGMGRLERPSLSSFNLPGRQQLGHSHGFSFGMNQSMLSNLAMSGLGHMQAKLPVMPVHPFLAQQQQQQQQQSPSNDFGFMMPKGEPNVEGIPERGGGLNLPNGSSVYQEIMSRMPLGPHM 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00063 750 FunFam WRKY transcription factor 33 522 588 - -
Phco10g00063 750 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 143 614 IPR044810 GO:0003700
Phco10g00063 750 SUPERFAMILY WRKY DNA-binding domain 316 377 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 SMART WRKY_cls 318 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 SMART WRKY_cls 535 594 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 ProSiteProfiles WRKY domain profile. 530 595 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 MobiDBLite consensus disorder prediction 290 304 - -
Phco10g00063 750 ProSiteProfiles WRKY domain profile. 319 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 MobiDBLite consensus disorder prediction 369 418 - -
Phco10g00063 750 MobiDBLite consensus disorder prediction 63 92 - -
Phco10g00063 750 Gene3D WRKY domain 522 588 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 Pfam WRKY DNA -binding domain 536 592 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 Pfam WRKY DNA -binding domain 319 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 SUPERFAMILY WRKY DNA-binding domain 527 595 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00063 750 MobiDBLite consensus disorder prediction 1 21 - -
Phco10g00063 750 FunFam WRKY transcription factor 309 378 - -
Phco10g00063 750 MobiDBLite consensus disorder prediction 691 707 - -
Phco10g00063 750 MobiDBLite consensus disorder prediction 34 94 - -
Phco10g00063 750 MobiDBLite consensus disorder prediction 290 325 - -
Phco10g00063 750 MobiDBLite consensus disorder prediction 691 734 - -
Phco10g00063 750 MobiDBLite consensus disorder prediction 467 506 - -
Phco10g00063 750 Gene3D WRKY domain 309 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00063 Phco-Chr10 445407 448931 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco10g00063 WRKY 3.8e-24 CL0274