Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00059 ATGTCGGAGAGCGATCAGCGCCGTCTTCTGGGGCTGTCGGAGGATGACGTGGAAGCTCGAGGGTCGGAATTGGCCGTCGTCAATGGCGGCGGCGGCGGCAACAACAGCAACAGCAAAGGTTTGAGAGATTTGTTAAGGTTGTCGGGTCACCGACAGAGTTTCAAGCGCATTGAGAAAGAGGACGATAGAGATAGAGAGAGGGATAGAGATAGAAGGGATCAGAATCGGCATCACCACGATGTGGATCTTGATTCTACTGTTGAGGTGCTTGGCGACAGTGCACCTCCTGAATGGGCGTTGCTACTCATTGGTTGCCTCATTGGACTCACAACTGGCCTCTTTGTTGCCTTTTTCAATAAAGGGGTGCATATAATACATGAATGGGTATGGGCTGGTACTCCAATTGAGGGTGCTGCCTGGCTTCGTATTCAGAGATTGGCTGATACATGGCATCGAATCCTTTTAATACCTGTCACTGGAGGAGTCATTGTTGGAATGATGTGTGGTTTACTGGAAATACTGGACCAAATAAAGCAATCCACTGCGTCTCAAACACAAGGTTTTGATTTTCTTGCAGGAATCTTTCCAACAATAAAGGCTATTCAGGCTGCAGTTACTTTAGGTACTGGCTGTTCATTGGGGCCTGAAGGTCCTAGTGTTGATATTGGGAAGTCATGTGCCAATGGATTCTCACTAATGATGGAACACAACAGAGAAAGGAAAATAGCACTTGTTGCAGCTGGTGCAGCAGCTGGAATTTCGTCAGGCTTCAATGCACCAGTTGCTGGTTGTTTCTTTGCTATTGAAACTGTGCTGAGGCCTCTCCGAGCAGAGAACTCTCCCCCATTTACAACTGCCATGATTATATTGGCTTCTGTTATCTCATCAACTGTATCAAATGTTTTACAGGGGATCAAATCAGCTTTTACAATTCCCGAGTATGATTTGAAATCTGCTGCTGAGCTACCTTTATACCTGATATTGGGAATGCTTTGTGGTGTTATCAGTGTGGCCATGACTCGTTTGGTTGCTTGGTTCACCAAATTGTTTAAGATTATTCAGGATAAGTTTGGCATTCCTACTGTGGTCTGCCCTGCTTTAGGTGGCTTGGGAGCTGGGATTATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCACAAATGTGGAAGAAATTTTGCGTACTGGAAAGAGTGCTTCAGCCCCTGGAATATGGCTTCTAACTCAATTGGTAGTTTCTAAGGTTATTGCAACAGCTCTTTGCAAGGGATCTGGACTAGTTGGTGGTCTTTATGCACCAAGTTTAATGATAGGTGCTGCAGCTGGTGCTGTATTTGGAGGCTTTTCTGCTGAAGTTATTAATTCAGCAATTCCCGGAAATGCTGCTGTTGCTCAGCCCCCAGCATATGCTCTGGTTGGAATGGCGGCTACATTAGCATCTGTTTGTTCTGTTCCTTTGACTTCAGTTCTACTTCTGTTTGAGCTGACAAAAGATTATAGGATACTGCTTCCACTCATGGGAGCTGTTGGATTGGCAATATGGGTTCCCTCAGTGACAAACCAGGGGAAGGAGAGTGATACAACTGATACAAGTAGTTCATCAAGAGGATATTCTCCAGTTTCACATGCTGGAGATGATAATGAGGATAGCTGGAGACAAGCCAATGATGGGAATGATTTAGAACTCCGTATTGTTGGGAATGGCGCTGATCATGAAGCAATTGATAAGGAACTGCTTCTGGAAAATCTTCAGGTTTCTCAGGCAATGTCAAAACAATATTTTAAGGTTTTGTCATCTGCAACCTTGAAAGATGCAATAAAATGCATGCATGACAGCCAGCAGAATTGTGTGCTGGTGGTTGATAAAGAAGATTTTCTAGAAGGAATATTGACATATGGTGACATAAGAAGGTGTCTGTCCCAGGAGTCTACTGACCCTTTGAAGGGTGATTTAGTGGTTCTGGATGCAAACACGTGCCTTGTTTCCTCTGTTTGTACTCGAGGGATGAGCTATCGTGGACGAGCACGAGGAATTTTGACCTGCTATCCAAATACTAGCTTGGCTATGGCCAAAGAGTTGATGGAGGCCAAGGGCATTAAGCAATTACCAGTAGTTAAACGTGGTGGAGACCAGAGTAGAGAAAGAAAGAGGAGAATTGTTGGTCTTCTTCATTATGATGCACTATGGCAATGTCTCAGGAAAGAGATTAATCACAGGCAAACAGCCTATCAAAACATGACAGATAACAGTTTGGCAGTGACAACAACAAATGGACATTGA 2283 0.4428 MSESDQRRLLGLSEDDVEARGSELAVVNGGGGGNNSNSKGLRDLLRLSGHRQSFKRIEKEDDRDRERDRDRRDQNRHHHDVDLDSTVEVLGDSAPPEWALLLIGCLIGLTTGLFVAFFNKGVHIIHEWVWAGTPIEGAAWLRIQRLADTWHRILLIPVTGGVIVGMMCGLLEILDQIKQSTASQTQGFDFLAGIFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEHNRERKIALVAAGAAAGISSGFNAPVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNVLQGIKSAFTIPEYDLKSAAELPLYLILGMLCGVISVAMTRLVAWFTKLFKIIQDKFGIPTVVCPALGGLGAGIIALKYPGILYWGFTNVEEILRTGKSASAPGIWLLTQLVVSKVIATALCKGSGLVGGLYAPSLMIGAAAGAVFGGFSAEVINSAIPGNAAVAQPPAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVTNQGKESDTTDTSSSSRGYSPVSHAGDDNEDSWRQANDGNDLELRIVGNGADHEAIDKELLLENLQVSQAMSKQYFKVLSSATLKDAIKCMHDSQQNCVLVVDKEDFLEGILTYGDIRRCLSQESTDPLKGDLVVLDANTCLVSSVCTRGMSYRGRARGILTCYPNTSLAMAKELMEAKGIKQLPVVKRGGDQSRERKRRIVGLLHYDALWQCLRKEINHRQTAYQNMTDNSLAVTTTNGH 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00059 760 MobiDBLite consensus disorder prediction 21 42 - -
Phco10g00059 760 ProSiteProfiles CBS domain profile. 670 742 IPR000644 -
Phco10g00059 760 FunFam Chloride channel protein 571 730 - -
Phco10g00059 760 Pfam CBS domain 586 640 IPR000644 -
Phco10g00059 760 Pfam CBS domain 678 725 IPR000644 -
Phco10g00059 760 FunFam Chloride channel protein 88 532 - -
Phco10g00059 760 PRINTS Chloride channel signature 250 269 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Phco10g00059 760 PRINTS Chloride channel signature 486 505 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Phco10g00059 760 PRINTS Chloride channel signature 427 447 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Phco10g00059 760 PRINTS Chloride channel signature 199 218 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Phco10g00059 760 PRINTS Chloride channel signature 468 484 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Phco10g00059 760 Gene3D - 569 733 IPR046342 -
Phco10g00059 760 MobiDBLite consensus disorder prediction 522 555 - -
Phco10g00059 760 SMART cbs_1 593 641 IPR000644 -
Phco10g00059 760 SMART cbs_1 678 734 IPR000644 -
Phco10g00059 760 SUPERFAMILY Clc chloride channel 96 520 IPR014743 -
Phco10g00059 760 Gene3D Clc chloride channel 85 531 - -
Phco10g00059 760 MobiDBLite consensus disorder prediction 522 541 - -
Phco10g00059 760 CDD Voltage_gated_ClC 111 513 - -
Phco10g00059 760 MobiDBLite consensus disorder prediction 56 78 - -
Phco10g00059 760 SUPERFAMILY CBS-domain pair 584 738 IPR046342 -
Phco10g00059 760 ProSiteProfiles CBS domain profile. 590 648 IPR000644 -
Phco10g00059 760 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 15 745 - -
Phco10g00059 760 CDD CBS_pair_voltage-gated_CLC_euk_bac 590 730 - -
Phco10g00059 760 Pfam Voltage gated chloride channel 191 516 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00059 Phco-Chr10 415950 426123 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00059 10 415950 426123 Phco10g00059 10 415950 426123 ECH