Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00057 ATGGAAAGCGAAAGAGAGGACAACAACAAAGGCCCCGATTCAACACACGCCGCCATCTCTAGCACACTTAAAATTAAGATTGTGAGCTGCAGCAAACAAGGTGGAGAGAGTTTAGACAACTCAAACTTGCCTTCACCAAACATAAACAATGCCATAGAGTCATCACCTTATGGTTCTCCTCTTGTGTCACCACCTTCATCAGCATTTGTTTCAGCATTGCAGTCTCCATATATATCTCCAAGGGCCATTATACCAGACCCACCTAATGGATCTCCTTTGGAAAACCAACCACCACTACTAACAACAACCACTTCCACCACCAACCCTTCCACCCCTGAAGATGTGCCAAGCAGTTCCTACACTCCCCCTTCCGATCAATATGAGTTCTCTGATGACACCGCTGACACAAAGCTCAAATATGTGACATGTGTTCCTGAACCGGCTCCTCCACGCATCTCATTCTCTTTTCCAGTCCCTAGAATTTCCTTCGCAAAAGGCCCTATCTCACCAGCTACCAATGCCAAACTCAGAAGCTGTGATGTCTACATTGGATTCCATGGCCAGAACCCCAACTTGGTGCGCTTCTGCAGGTGGCTTAAGTCTGAGCTTGAGCTTCAAGGGATCGATTGCATGCTTGCTGATAGAGCAAAGTACTCAGACAATCAGAGCCATGAGATTGCTGATGGAGTCATTTGCTCAGTGGCTTTTGGAGTGGTGGTTGTTACAAGTTCCAGCTTTCTCAACCATTTTAGCATGGAGGAGGTGAGATTCTTTGCTCAAAAGAAGAACTTGATTCCTCTCTTGTTTGACACAGGACCTGCAGAGATTATGGCTCTTCTTAACTGCAAATCAATTGACAAAGAATGTAAAGAGGCAATAGATGGACTTATGAAGTGCAATGAATTCAATCTAGAGGCTAATGATGGTAATTGGCGAAGCTGCATAGCGAAAGCTGCTGGTATTTTAAGAGCAAGACTTGGTAGGAAGAATGCTGAGCAGAAGGATAATATGCAAGGACTTGAGAACTTACCCTTTCCAAGGAACACATACTTTGTAGGAAGAGAGAAGGAGATTATGGAGATTGAGGGTCTTTTTTTTGGTCGAGGGAGTTGCATGGAAGTCCAAGATCATTGTAGGTCATTCACCAAAGGAGAAGCTAGTGGAAGTGGACAATCTGAAGGCCTTGCTGATGAGGAAAGTGAACCAGTGATAGGTAGGTGTGGGAGGTATATTAGTCTAGAGATGGGGAGAAGCAAAGAACCAACTTTAGAGGCTTGGGTAGAACCGATCATAGGAAACAACTCTTTGAAGAGGTTGAAGAATAAGAAGTCAAAGAGTGGAAACTACAAGAGCGTGTGTAGCAGTGTGATTTGCATTAATGGGGTTTCTGGAATTGGAAAGTCAGAGCTGGCACTAGAATTTGCTCATAGATATCACCAGAGGTACAAAATGGTCTTGTGGGTTGGTGGTGAAGCCAGGTATCTGAGGCAGAACTTATTGAACTTGTCTCTCAATTTGGGATTGGATGTTGGTGCTGATTCTGAAATCGAAAGGGGTAGGATTCGTAGCTTTGAGGATCAAGAATTTGAGGCATTCAAGAGAGTGAAGAGGGAACTGTTTGGTGAGACTCCTTACTTGCTGATAATTGACAATCTTGAGACAGAAGTGGAATGGTGGGAAGGGAAGGATCTGTATGACTTGATACCAAGGAACACTGGAGGAACACATGTGATTGTTACTACTAGATTGTCCAAAGTAATGAGCTATGATACTATTCAGCTTCCACCTTTGCCATTATCTGATGCAATGATTCTAATGATAGGAAGAAAAAAGAAAGAGTATTCGGCAGATGAGATAGACTTGCTTGAAAAATTCAATGAGAAACTTGGAAGGTTGAGCTTTGGTTTGTGGATGATTGGTTCACTGTTGGCTGAACTTTCAATAGACCCTTCTTGTCTCTATGAGGCCATTAACCAGGTGCCACTCAATGAAGATTCAAACTCTTGCTATATGAGCATTGCAGAAGGGCAATGGTGCAAGAGCAACCCTTTTCTCGTGAAGACCCTTCTCTTTTGTTTGGAAACTTTGGAGAAAACTAAAGCTAAAGGGAACCTCTTGGCCATAAGAATGCTGCTTGTAAGTGGCTGGTTTTCCCCCTCTCCCATTTCAGCCAGTTTATTAGCTAATGCAGCAAAGAGTATTCCTACAGTGGAAAGCCGTTTCAAGAAGTGGACCAAATCTCTGAGCCTAGCAACTAGTTGTTTATCACCACGGACGTGGAAAAACGAAGAAGATTCTGCAATGGTTCTTGTGAAAATGGGACTGGCTAGGAGGGTCAATCAACATGATGGATGTTGGCTTCATTTCCACCCCATAACACAAGCATTTTCCAAAAGAAAAGGTGGTTTGCAATATGCCAAGGCTGCAATTCAAGGAGTGAGGAAAATGGGCAGCCAAGTTAACTCAGATCATTTGTGGGCCTCAGCTTTCCTTGTGTTCGGGTTCAAATCTGAGCCCCCCCTGGTGCAGCTGAAGGCAATTGACATGGTTTTGTACATAAAGAGAACAGCTCTCCCTCTAGCAATTCAAGCCTTCACCACTTTCTCAAGATGCAATTCATCCTTGGAGCTCTTGAGGGTGTGCACCAATGCACTGGAGGAAGTTGAGAAGTCTTTTGTGTCTCAAATCCAAGATTGGTCTTCCCATGGTTCAGTTTGTTGGAAAAGGAGGCTGCAAAGAGGCCAAAAAGTAGATGAATATGTGTGGCAAGATGTGACCTTGTTGAAGGCAACACTGCTGGAGACAAGAGCAAAGTTGCTAGCAAGAGGGGGGCATCTAGACAGTGCCAAGGAACTGTGCAGAACATGCATCAGTATCAGAACTGTGATGCTTGGCCATAACCATGCACAGACCTTGGCTGCTCAAGACACATTGGCAAGGTTGGTGAGAATGAGGAGCAAGATATGA 2967 0.4415 MESEREDNNKGPDSTHAAISSTLKIKIVSCSKQGGESLDNSNLPSPNINNAIESSPYGSPLVSPPSSAFVSALQSPYISPRAIIPDPPNGSPLENQPPLLTTTTSTTNPSTPEDVPSSSYTPPSDQYEFSDDTADTKLKYVTCVPEPAPPRISFSFPVPRISFAKGPISPATNAKLRSCDVYIGFHGQNPNLVRFCRWLKSELELQGIDCMLADRAKYSDNQSHEIADGVICSVAFGVVVVTSSSFLNHFSMEEVRFFAQKKNLIPLLFDTGPAEIMALLNCKSIDKECKEAIDGLMKCNEFNLEANDGNWRSCIAKAAGILRARLGRKNAEQKDNMQGLENLPFPRNTYFVGREKEIMEIEGLFFGRGSCMEVQDHCRSFTKGEASGSGQSEGLADEESEPVIGRCGRYISLEMGRSKEPTLEAWVEPIIGNNSLKRLKNKKSKSGNYKSVCSSVICINGVSGIGKSELALEFAHRYHQRYKMVLWVGGEARYLRQNLLNLSLNLGLDVGADSEIERGRIRSFEDQEFEAFKRVKRELFGETPYLLIIDNLETEVEWWEGKDLYDLIPRNTGGTHVIVTTRLSKVMSYDTIQLPPLPLSDAMILMIGRKKKEYSADEIDLLEKFNEKLGRLSFGLWMIGSLLAELSIDPSCLYEAINQVPLNEDSNSCYMSIAEGQWCKSNPFLVKTLLFCLETLEKTKAKGNLLAIRMLLVSGWFSPSPISASLLANAAKSIPTVESRFKKWTKSLSLATSCLSPRTWKNEEDSAMVLVKMGLARRVNQHDGCWLHFHPITQAFSKRKGGLQYAKAAIQGVRKMGSQVNSDHLWASAFLVFGFKSEPPLVQLKAIDMVLYIKRTALPLAIQAFTTFSRCNSSLELLRVCTNALEEVEKSFVSQIQDWSSHGSVCWKRRLQRGQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSAKELCRTCISIRTVMLGHNHAQTLAAQDTLARLVRMRSKI 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00057 988 MobiDBLite consensus disorder prediction 81 129 - -
Phco10g00057 988 PANTHER DNA REPAIR PROTEIN RADA 51 983 - -
Phco10g00057 988 Gene3D - 428 593 IPR027417 -
Phco10g00057 988 Gene3D - 164 294 IPR035897 -
Phco10g00057 988 SMART AAA_5 453 611 IPR003593 GO:0016887
Phco10g00057 988 MobiDBLite consensus disorder prediction 95 129 - -
Phco10g00057 988 Coils Coil 323 343 - -
Phco10g00057 988 MobiDBLite consensus disorder prediction 32 67 - -
Phco10g00057 988 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 160 298 - -
Phco10g00057 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 660 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00057 Phco-Chr10 393452 396418 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00057 10 393452 396418 Phco10g00057 10 393452 396418 ECH