Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00037 ATGGATACCTCTGGTAGTACATGTGAGATAGTGGAATCAAGGGAAGAAATAATTTCTATGGTTGACAAACCTGAGAGTAGTTGTGCTCACAAATCAGGAAAAAAGTATTCGATTGAGGATGATATTAATCAGCTTTTCCAGGCTATTGATATTAAAAGTTCATCAAGAGGTCACAGTTCATCACGGTTACAAAGGAATGCTCTTAAAAGGCCAATAAAAGTCACTTCATCTCAGGCATCTGGAATTGGCATCTCAGAGCCTGTAAGTTTAAAGCAGGCACTAAGAGGGTTGTGCATCTCTCAGGCCTCAGAAATGGCTGCTTTGAAAAGATTGTCTAAGCCATGCAGTTCATCCAGAGTATCAGAGGCTGGTACCATAAAAAGGCTGTACACAGCAGTGGTAGATGAGGGGAAAGGGAACTTGGTTGAAATTTCTCTAGTGCCAGAGATATCTACTGCACCTTCTAATAAATTGCCCGGTGTAACTATATCAAGTTCGATTGATCATCGTACTAGTCCTTTGGTTGATGCTACAAAACCAAAAGAAATGCTGATTGGGTTTTCATCCCAAGATCAGATTGTTCCTCTGCCATTAGAGGTTGAGGGTGACAAACCAATAATGGACATTGGAAAACCAGTACTTGCACATTTGTCACCAGTTGCCTCTGCTAGTGAAGTGGTGCCAGAGGATAGAAGGGATCCTGCTTCCTTAAGCAAATCTTCTCTTAGTTCTTCAATGCCAGTTAAGGGGAAGGAAGCAAATTTACTTCCTGCATCTTGTCCACCTAGCTCTGGCACTGGTAATGGAGGGGATAAATCCACAAGCAGTAATACGTGTTTGTCAAAGCCAATATTCAATAACTTGAACTTCCTTAAGAAAAAGGTAAAGCAGGATTTAAGTTCTGCCTCAAGCTGCTCCACTCCATGTACAAGTAATTTGTACAAGGAGGTTGGAAATTCTGATTTGAAGCAGGGAGTGAAAGAAAATGAGAAATTGTCTCCAAGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTTGGTACGGATTCAAGCAAACCTGGTTTCAGCTTGAACTGCAATAAGAGAACTAAGTTTCTGGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGCGAGTTCTCTCAAAGTTCAAAAAGTAGCATTGGTGAGTATAGTAGTAGCACAAGCATCAGTGAGGAAAGCAGTCTTAGTGGTTCCAGCCGTGGTGGCCACAGACCTCACATGTCGAAACACATGAGATGGGAAGCTATCCGTGCTGTTCAGCAGCAACACGGTAATTTAAATTTGAAGCACTTTAAGCTGCAAAAGAGACTTGGTAGTGGGGACATTGGAACTGTTTACCTTGCAGAACTAATTGGTACAAGCTGCCTTTTTGCACTCAAAGTGATGGACAATGAATTTTTGTCAAGTCGGAAGAAAATGTTCAGGGCCCAAACTGAAAGAGAGATCCTTCAGATGCTAGATCATCCATTTCTTCCTACGCTGTATTCTCATATTGCAACAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCCGGAGGAGATCTGCATGTGCTGCGACAGAGGCAGTCATACAAGAGTTTCTCGGAACAAGCAACTAGGTTTTATGTTGCTGAGGTTCTTCTCGCCCTGGAGTATTTGCACATGCTGGGAGTTGTATATCGAGACCTAAAGCCAGAAAATATCCTAGTACGAGAAGATGGACATATTATGCTGACAGATTTTGATTTGTCACTCAGGTGTTCTGTCAATCCAATGTTAGTCAAGTCATCTTCACCTGACACAGATGCCGCGAAGAAGACCTCCAGTCCCTGTTCTGAAGCTAGCTGCATACACCCTTTCTGTCTCCAACCAGATTGGCAAGTTTCCTGCTTTACTCCCATTCTATTATCCGCTGGAGCAAAATCCCGAAAGATGAAGTCTGACATAGCTTCTCATGTTGGTCCACTGCCACAGCTTGTGGTGGAGCCCACCAGTGCACGGTCTAACTCTTTTGTTGGAACCTATGAATATCTTGCACCGGAGATCATCAAGGGTGAGGGTCATGGGAGTGCAGTAGATTGGTGGACTTTTGGTATACTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGCCAATCAAATGAGGACACATTAGCCAATGTTGTGTCACAATGCCTTAAGTTCCCGGGTGCTCCAATAGTCAGTTTTCATGCCAGAGATTTGATCAGAGGGTTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCTGTAAAAGGTGCTGCTGAAATAAAGCAGCACCCCTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCAGCACCACCAGAGCTCCCCAAGTTTCGGGATTTTGGAAGTAGTGCTCCATCTATGGCTACAAATAAGGAGAATGCAAATGATTTAGAGGATATAGAAGATTGTGAAGAGTTTGAGCTGTTTTAG 2487 0.4262 MDTSGSTCEIVESREEIISMVDKPESSCAHKSGKKYSIEDDINQLFQAIDIKSSSRGHSSSRLQRNALKRPIKVTSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLSKPCSSSRVSEAGTIKRLYTAVVDEGKGNLVEISLVPEISTAPSNKLPGVTISSSIDHRTSPLVDATKPKEMLIGFSSQDQIVPLPLEVEGDKPIMDIGKPVLAHLSPVASASEVVPEDRRDPASLSKSSLSSSMPVKGKEANLLPASCPPSSGTGNGGDKSTSSNTCLSKPIFNNLNFLKKKVKQDLSSASSCSTPCTSNLYKEVGNSDLKQGVKENEKLSPSSSNHSIEVNSINVGTDSSKPGFSLNCNKRTKFLVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESSLSGSSRGGHRPHMSKHMRWEAIRAVQQQHGNLNLKHFKLQKRLGSGDIGTVYLAELIGTSCLFALKVMDNEFLSSRKKMFRAQTEREILQMLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQSYKSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPDTDAAKKTSSPCSEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKSDIASHVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGILLFELLYGKTPFKGQSNEDTLANVVSQCLKFPGAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSSAPSMATNKENANDLEDIEDCEEFELF 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00037 828 MobiDBLite consensus disorder prediction 326 349 - -
Phco10g00037 828 Pfam Protein kinase domain 444 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00037 828 Pfam Protein kinase domain 674 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00037 828 MobiDBLite consensus disorder prediction 222 276 - -
Phco10g00037 828 SMART serkin_6 443 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00037 828 MobiDBLite consensus disorder prediction 378 421 - -
Phco10g00037 828 Gene3D Transferase(Phosphotransferase) domain 1 527 795 - -
Phco10g00037 828 PANTHER FLIPPASE KINASE 1-RELATED 309 796 - -
Phco10g00037 828 FunFam serine/threonine-protein kinase D6PK-like 527 594 - -
Phco10g00037 828 Gene3D Phosphorylase Kinase; domain 1 443 796 - -
Phco10g00037 828 FunFam Serine/threonine-protein kinase D6PK-like 441 526 - -
Phco10g00037 828 SUPERFAMILY Protein kinase-like (PK-like) 417 796 IPR011009 -
Phco10g00037 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Phco10g00037 828 MobiDBLite consensus disorder prediction 385 413 - -
Phco10g00037 828 MobiDBLite consensus disorder prediction 329 349 - -
Phco10g00037 828 MobiDBLite consensus disorder prediction 259 276 - -
Phco10g00037 828 ProSiteProfiles Protein kinase domain profile. 443 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00037 828 CDD STKc_phototropin_like 441 800 - -
Phco10g00037 828 FunFam serine/threonine-protein kinase D6PK-like 672 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00037 Phco-Chr10 264974 268050 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phco10g00037 Pkinase 4.8e-37 CL0016