Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00032 ATGGAATCTCAATTAGTAGACAGAAATGATGCCATGGAAGTTTCTGGGGATATGGATTTAAGTACATATGAAGTTCAGGTAGATCAAGAAACATATAAAGTGGATCCAAATGAGGGGTGTGGAGCACTAGAGAGTTCTTCTGGGGGAGAGTTGGGTATCTGTGATGATGATCATGCTATTCAGGAACCATATGAAGGCATGGAGTTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCCCGACGTGTAGGATTTGTCATGCGTGTGATGTCATGTAGACGCTCAGAAAGGGATGGTAGGATTCTTGCCCGCAGGCTTGGGTGCAATAAAGAGGGTTACTGTGTCAGCATCAGAGGGAAATTTTCATCAGTTCGTAAACCTAGGGCCAGCACAAGGGAAGGCTGTAAGGCAATGATTCACATCAAATATGAGAAATCTGGAAAATGGATGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCACGTGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAACTTCGGCATAAAAAACGGTTGTGTGCAACATATCAAGAACAGCTGACTTCCTTTATGAAGGTTGTTGAAGAGCACAATGAGAAGCTCTCTACGAAAATTCATCATGTAGTTAATAATCTCAAAGAATTTGAATCCATAGACGAGCTTTTGCACCAAACATAG 729 0.406 MESQLVDRNDAMEVSGDMDLSTYEVQVDQETYKVDPNEGCGALESSSGGELGICDDDHAIQEPYEGMEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWMITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKVVEEHNEKLSTKIHHVVNNLKEFESIDELLHQT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00032 242 Coils Coil 176 203 - -
Phco10g00032 242 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Phco10g00032 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00032 Phco-Chr10 242725 244472 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco10g00032 FAR1 6e-29 CL0274