Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco105g00006 ATGAGGTTCAGCAGTATCACCGCCTTAAAACTCTTCCTCTTCCACCTCTTTACGCACCTCCAAGCCTACACCCCAGTCGACAATTTCACAATCAATTGCGGCGCCACTGGAACATCCTACGACGGTGAAACAACATGGACAGGGGACACAGCTTCAATGTTCTTGTCTCATCAAGACAACACCGTTTCCGCTAACCCAACAACACAACAATCTAATTCCACCCTTCAACTCCCCTACACCACAGCACGCCTCTCTCGTTCCCAATTCAATTACTCCTTCCCCGTAACCCCAGGTTCCTATTTCCTTCGCCTCTTCTTCTACCCCGCTTCTTACCCTTCCTTTCCTTCTACACAAGCATCCTTCACCGTTCATTGCAACCAATTCACCCTCTTCTACGGTTTCAGCACCGACAAGGATCACACTGAAACCATCTTCAGAGAGTACGTCGTCAACGTTCACAACGGTGAGACGCTCAACCTCAGCTTCACTCCCTCACAACCTAACTCCCACGCTCTCATCAACGGAATCCAGGTATTTTCTATCCCAACCGATCTCTATTACGCTTCACCACATCATGCGGGCTTCAAGCTTGTCGGAACCCACACCTTGTACCGCGTTACATCCGACACTGCTCTGCACGCAGAGTATAGACTCAAAGTTGGAGGTCAAGGAATTTCGCCGCCAAAGGAGATTGGTTTGTTCAGAAACTTGGTCGACGGTGACGAACACTATTTAATAAAAGAAAAAAATCCTAACAATGATGATCTAGCAGGCGACGTAGATGACCATGGTTCTGTGGCACCCAAGATCATCTCTAACATCGGTGACAGGGTGTTCTGCATTTACATAGGGAGCGACCTGGCTGAGGATCACGCTGATGTTTTGAGATGGAGCAACCAACTTAAGGATCTTGCTGTGCAGAGAAACTTCGTCGTTTTGATTCCCAGAAATGATACTCAGGAAAAGGTTAATCTCTCGCTCCAATTGCATCCTTATTTGAATTCGAGCAGTCCGTGCTTGAGTGGCCTCGAGATCTTCAAAATCAGCGGCTCCAACAACCTCGCCGGCGGCATAGCAGTCGGAGAGAGAAGGAACGCCTTATCAGTCGAAAAGAAAATGATTAAACACAAAATTATCATAGCAGGAATGGTTTTCGTCTTGGTCTCGTCTGTTGGTTTCGTCGTCATTTGGTGCGCAAGATCCATGTTAATTCCACTCTCGTTCTCAACCAATGCACACGAGCTGTCAACCAATGCACACGAACTGTCAGCCAACACGTTCATCTGCCGACGCTTCTCCCTCCTCGAGATCAAAGCCGCCACCAACAACTTCGACGATGCTTCCGTCATCGGCGTCGGGGGATTTGGCCACGTGTACAGGGGCTTCATCCGCAGAATTTTCATCCCGGTGACTCTCAAGCTCTTCAAACCCGGTTCAAATGACTCTGAAAAGTTTCTGAACGAGATCGAGGTGGCTATCAAGCGCCACAAACCGGGTTCAAAGCAGGGCCCTGAAGAGTTTCTGAACGAGATCGATATTCTCTCGCAGCTCCGCCATCGCAATATCGTTCCACTCATCGGTTACTGCAACAATCAGAAGGAGATGATCCTGGTCTATAATTTCATGGCACGAGGCAACCTCCGCGAGCATCTCTACAACAGCGACAAACCTCCGTTGCCATGGAAGCGACGCTTGCAGATTTGTATCGACGCAGCACACGCGCTGCATTATCTCCACTCCTGCGCCAAAAAAAACACGATCATCCACAGCGACGTGAAAACCACGAACATCTTGTTGGATGAGGAATGGGTGGCGAAGATTTCGGACTTTGGGCTTTCCAGAATTAGGCCTACGGGCGAGTCCAAGTCGCATGTCCCCCCTACCGCCATGAAGGGTAGCTTTGGGTATATAGATCCAGAGTACTATAAACGACAACATTTGACGGAAAAGTCTGACGTGTACTCTTTCGGGGTAGTGTTGTTTGAGGTACTGTGCGCTCGTCCTCCTCTGATCCGCACCGCGGAGCCGAGACAAGAGTCGCTTGGGAATTGGGTTAGATACTGTTACCAAAATGGGACCATGGCACAGATATTAGACCCCACGTTGAAGGGGAAGATCGCGCCCGATTGCTTTAGAATGTTTTGCCAGATTGGGTTGAGTTGTTTGTCAGATATTGGGGAGCAGAGACCGTCCATGAACGACGTCGTTGGGATGCTTATGTATGCCCTGCAACTACAAGAAAGTGCAGACATTAGGACGAATTGA 2265 0.4914 MRFSSITALKLFLFHLFTHLQAYTPVDNFTINCGATGTSYDGETTWTGDTASMFLSHQDNTVSANPTTQQSNSTLQLPYTTARLSRSQFNYSFPVTPGSYFLRLFFYPASYPSFPSTQASFTVHCNQFTLFYGFSTDKDHTETIFREYVVNVHNGETLNLSFTPSQPNSHALINGIQVFSIPTDLYYASPHHAGFKLVGTHTLYRVTSDTALHAEYRLKVGGQGISPPKEIGLFRNLVDGDEHYLIKEKNPNNDDLAGDVDDHGSVAPKIISNIGDRVFCIYIGSDLAEDHADVLRWSNQLKDLAVQRNFVVLIPRNDTQEKVNLSLQLHPYLNSSSPCLSGLEIFKISGSNNLAGGIAVGERRNALSVEKKMIKHKIIIAGMVFVLVSSVGFVVIWCARSMLIPLSFSTNAHELSTNAHELSANTFICRRFSLLEIKAATNNFDDASVIGVGGFGHVYRGFIRRIFIPVTLKLFKPGSNDSEKFLNEIEVAIKRHKPGSKQGPEEFLNEIDILSQLRHRNIVPLIGYCNNQKEMILVYNFMARGNLREHLYNSDKPPLPWKRRLQICIDAAHALHYLHSCAKKNTIIHSDVKTTNILLDEEWVAKISDFGLSRIRPTGESKSHVPPTAMKGSFGYIDPEYYKRQHLTEKSDVYSFGVVLFEVLCARPPLIRTAEPRQESLGNWVRYCYQNGTMAQILDPTLKGKIAPDCFRMFCQIGLSCLSDIGEQRPSMNDVVGMLMYALQLQESADIRTN 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco105g00006 754 Pfam Malectin-like domain 31 223 IPR024788 -
Phco105g00006 754 Gene3D Transferase(Phosphotransferase) domain 1 542 753 - -
Phco105g00006 754 PANTHER OS07G0166700 PROTEIN 428 746 IPR045272 GO:0004714|GO:0006468
Phco105g00006 754 SUPERFAMILY Protein kinase-like (PK-like) 429 737 IPR011009 -
Phco105g00006 754 Gene3D Phosphorylase Kinase; domain 1 428 541 - -
Phco105g00006 754 SMART serkin_6 444 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco105g00006 754 Pfam Protein tyrosine and serine/threonine kinase 449 738 IPR001245 GO:0004672|GO:0006468
Phco105g00006 754 ProSiteProfiles Protein kinase domain profile. 444 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco105g00006 754 FunFam Receptor-like protein kinase FERONIA 542 754 - -
Phco105g00006 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Phco105g00006 754 Gene3D - 28 182 - -
Phco105g00006 754 FunFam FERONIA receptor-like kinase 28 182 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco105g00006 PK_Tyr_Ser-Thr 2e-46 CL0016