Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00072 ATGGAACCGGAGGAAGCCGCCGTCACCGCCGTCACCGCCTACGACGGAAGTGGCGACGAGGGAATGCTGGTGTTGGACGGCGGCGATGTCGGCGGCGGCAAGGACAGAGTGAAGGGCCCTTGGTCGCCGGAAGAGGACGCCATTCTGAGTCGTCTCGTTAGCAAGTTCGGCGCCAGAAACTGGAGCCTCATCGCGCGCGGGATCAGTGGAAGATCCGGCAAGTCGTGCCGCCTCCGGTGGTGCAACCAGCTCGACCCTTCCGTTAAGCGCAAGCCCTTCACCGATGAGGAGGACAGAATCATAGTTGCTGCTCATGCAATCCATGGGAACAAATGGGCAGCCATTGCCAGGCTTCTACCTGGAAGAACGGATAATGCCATTAAGAACCACTGGAATTCCACTCTGAGGCGTCGGGGAGTTGAACTTGATAAGATTAAATTAGAATCTGGTAACTTTATGGAAGATGCTAGCTTGGAGAAAGCAAAAGCATCCTCGGAAGACACTCTATCATGTGGGGATGTTTCTTTGAAATCATCAGAAGGGAGAGATGTCAGTTCTGTGGAGATCATGGATGATAAATCTGATGGTAAAGCACAAACTGAGGGCCAATTACACCACAAAGTCAAGGATCCACCTACCCTTTTTCGGCCAGTAGCTCGTGTAAGTGCTTTCAACGTTTATCACTCGTATGACGTTATACAGCCCTCAACATCAATTCAAAGACCTGTCCCGATGCAAGGACCCATTTTACAATCTTCAAGACCAGATATGGAATTTTGTAGAATGCTTGAAGGAATTTGTGGTGACCAGGCAGTACCTCACCAGTGTGGCCATGGTTGCTGTGCTGCTCCAAATGGTAGAAAGTCCGAAAGCTCTCTGTTGGGACCGGAATTCATTGAATTTTCTGAACCCCCATCTTTTCCAAATTTTGAGTTGGCTGCAATCGCTGCAGATATCAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGTAGTGTGAAAATTATGGGAAACACCTCTGGCAGTGCAATGTCTAATGGATCTCGAGTACATATTGGCCATTAG 1068 0.4934 MEPEEAAVTAVTAYDGSGDEGMLVLDGGDVGGGKDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVELDKIKLESGNFMEDASLEKAKASSEDTLSCGDVSLKSSEGRDVSSVEIMDDKSDGKAQTEGQLHHKVKDPPTLFRPVARVSAFNVYHSYDVIQPSTSIQRPVPMQGPILQSSRPDMEFCRMLEGICGDQAVPHQCGHGCCAAPNGRKSESSLLGPEFIEFSEPPSFPNFELAAIAADISNLAWLKSGLENSSVKIMGNTSGSAMSNGSRVHIGH* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00072 355 FunFam Transcription factor MYB44 92 138 - -
Phacun635g00072 355 Gene3D - 37 89 - -
Phacun635g00072 355 Gene3D - 92 138 - -
Phacun635g00072 355 FunFam MYB transcription factor 38 89 - -
Phacun635g00072 355 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Phacun635g00072 355 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Phacun635g00072 355 CDD SANT 92 135 IPR001005 -
Phacun635g00072 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 88 IPR017930 -
Phacun635g00072 355 SUPERFAMILY Homeodomain-like 35 131 IPR009057 -
Phacun635g00072 355 PANTHER MYB PROTEIN-RELATED 38 188 - -
Phacun635g00072 355 CDD SANT 40 82 IPR001005 -
Phacun635g00072 355 SMART sant 37 86 IPR001005 -
Phacun635g00072 355 SMART sant 89 137 IPR001005 -
Phacun635g00072 355 Pfam Myb-like DNA-binding domain 41 98 - -
Phacun635g00072 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 139 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00072 32 355 MYB Transcription Factor Family AT3G09230 51.343 3.24e-108 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phacun635g00072 Myb_DNA-bind_6 3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00072 K09422 - gmx:100813406 611.683