Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00069 ATGCCACATGAAACTCTGGCCAAGCATCTCTTTCATTGGGAGGCACAGCCAATGAAGTGGGCCATGAGGTTGAGGGTGGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACTAGTAAAGGAAGGGGCTTGTATCATGATCTGAATGCCTACAGGATCTTGTTTGATCAGGATGCTAATCCCAGGTTGTCTTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGCACAAACTTGGCTTTCACCCCTCCTGAGTACTTACGGACTGGTAGAGTGACCCCAGAGAGCGTGGTTTACAGTTTTGGAACTCTGCTGCTAGATCTCTTGAGTGGTAAACATATTCCACCAAGCCACGCACTTGATCTGATTCGTGGCAAAAACTTTTTGATGTTGATGGATTCTGCCTTAGAGGGTCACTTTTCAAAGGATGATGGAACTGAGTTGGTTCGTTTGGCTTCTCGTTGTTTGCAATATGAAGCTCGTGAGAGGCCAAATGCGAAGTCTCTGGTTTCGTCTCTTATGTCACTTCAGAAAGAAACAGAGGTCCCCTCATATGTTCTGATGGGTCTCAGGCAAGAAAGTGCATCCTCAACAAAGCAATTGTCATTAACACCTTTTGGTGAAGCTTGTTTGAGACTTGATCTTACTGCAATCCATGAAATATTGGAGAAGACTGGTTACAAGGACGATGAAGGAATTGCCAATGAGCTTTCCTTTCAATTGTGGACCAGCCAAATGCAGGAAACCTTGAATTTGAAGAAGCATGGCGATACTGCTTTTCGAGCTAAAGACTTTGTCACTGCCATTGACTGCTACACTCAATTCATAGAAGGAGGGACCATGGTGTCACCAACAGTGTATGCGAGGAGATGCTTATCTTATTTGATGAATGAGATGGCACAAGAAGCTCTTGGGGATGCCATGCAAGCCCAAGTGGTATCTCCTGAGTGGCCTACTGCTTTGTATCTTCAAGCAGCTTGTCTTTTCAGCCTTGGAATGGAGAATGATGCTCAAGAGACTCTCAAAGATGGGACTAACATGGAAGCCAGAAAAAACAAAAACTGA 1074 0.446 MPHETLAKHLFHWEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVSSLMSLQKETEVPSYVLMGLRQESASSTKQLSLTPFGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIEGGTMVSPTVYARRCLSYLMNEMAQEALGDAMQAQVVSPEWPTALYLQAACLFSLGMENDAQETLKDGTNMEARKNKN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00069 357 SUPERFAMILY TPR-like 253 346 IPR011990 GO:0005515
Phacun635g00069 357 Gene3D Tetratricopeptide repeat domain 249 357 IPR011990 GO:0005515
Phacun635g00069 357 Pfam Protein tyrosine and serine/threonine kinase 2 176 IPR001245 GO:0004672|GO:0006468
Phacun635g00069 357 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun635g00069 357 FunFam probable serine/threonine-protein kinase At4g35230 250 357 - -
Phacun635g00069 357 Gene3D Transferase(Phosphotransferase) domain 1 2 193 - -
Phacun635g00069 357 FunFam probable serine/threonine-protein kinase At5g41260 2 193 - -
Phacun635g00069 357 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 356 IPR045845 GO:0004672|GO:0009742
Phacun635g00069 357 SUPERFAMILY Protein kinase-like (PK-like) 1 186 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00069 1 176 Glycoside Hydrolase AT3G07070 33.498 1.95e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Phacun635g00069 PK_Tyr_Ser-Thr 9.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00069 - - gmx:100814477 711.835