Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00055 ATGGCCATAGCCCCAGCATACGAAGAACACCTCCCTGCATCCCCGAGCTGGCTGAACAAAGGTGACAACGCGTGGCAGCTAACAGCAGCAACTCTGGTGGGTCTCCAAAGCATGCCAGGCCTAGTCATCCTCTACGCCAGCATAGTGAAGAAAAAATGGGCAGTGAACTCTGCTTTCATGGCTCTCTACGCCTTCGCAGCAGTCCTAATATGTTGGGTCCTCCTGTGCTACCGCATGGCCTTCGGGGACAAACTCCTTCCCTTCTGGGGTAAGGGTGCCCCTGCGCTGGGCCAAAAGTTTCTGATAAACCAGGCCAAGGTCCCTGAGACCACCCACCACTTCAAGAATGGAACCGTTGAGAGCAAGAAATCAGAGCCCTTATTTGCCATGGCTTCCCTTGTCTACTTCCAGTTCACTTTTGCTGCTATCACGCTTATCTTGTTGGCTGGGTCGGTTCTTGGGAGGATGAACATTAGGGCTTGGATGGCTTTTGTGCCTCTTTGGCTTGTTTTTTCTTACACTGTTGGGGCTTTTAGTCTCTGGGGTGGTGGCTTTCTCTACCATTGGGGGGTCATTGATTACTCTGGAGGCTATGTTATTCATCTTTCTTCTGGAGTTGCTGGCTTCACTGCTGCTTACTGGGTTGGGCCAAGGTTGAAGAGTGACAGGGAGAGGTTCCCACCAAACAATGTGTTGCTGATGCTTGCGGGTGCTGGGTTGCTGTGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGCAGCCAACATTGATGCTTCCATTGCTGTGCTCAACACCAACATTTGTGCAGCCACTAGCCTCCTTGTTTGGACCTCTCTGGATGTCATCTTTTTCAGCAAACCATCTGTTATTGGAGCTGTTCAGGGCATGATGACTGGACTCGTTTGCATCACCCCAGGAGCAGGGCTTGTGCAATCTTGGGCAGCTATAGTGATGGGAATACTTTCAGGGAGCATTCCATGGATGACTATGATGATCCTCCACAAGAAGTCAAACCTACTACAGAAGGTTCAGTATTTTTCTATGTGA 1053 0.5062 MAIAPAYEEHLPASPSWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLLCYRMAFGDKLLPFWGKGAPALGQKFLINQAKVPETTHHFKNGTVESKKSEPLFAMASLVYFQFTFAAITLILLAGSVLGRMNIRAWMAFVPLWLVFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGVAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIDASIAVLNTNICAATSLLVWTSLDVIFFSKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWMTMMILHKKSNLLQKVQYFSM* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00055 350 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Phacun635g00055 350 Gene3D Ammonium transporter AmtB like domains 4 348 IPR029020 -
Phacun635g00055 350 Pfam Ammonium Transporter Family 24 338 IPR024041 GO:0008519|GO:0016020|GO:0072488
Phacun635g00055 350 PANTHER AMMONIUM TRANSPORTER MEP2 9 342 IPR001905 GO:0008519|GO:0016020|GO:0072488
Phacun635g00055 350 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005886
Phacun635g00055 350 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005886
Phacun635g00055 350 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005886
Phacun635g00055 350 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005886
Phacun635g00055 350 FunFam Os01g0831300 protein 9 224 - -
Phacun635g00055 350 SUPERFAMILY Ammonium transporter 17 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00055 130 346 Inorganic Solute Cotransporters AT2G38290 83.410 3.86e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00055 K03320 - gmx:100798599 655.21