Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00054 ATGGCCATAGCCCCAGCATACGAAGAACACCTCCCTGCATCCCCGAGCTGGCTGAACAAAGGTGACAACGCGTGGCAGCTAACAGCAGCAACTCTGGTGGGTCTCCAAAGCATGCCAGGCCTAGTCATCCTCTACGCCAGCATAGTGAAGAAAAAATGGGCAGTGAACTCTGCTTTCATGGCTCTCTACGCCTTCGCAGCAGTCCTAATATGTTGGGTCCTCCTGTGCTACCGCATGGCCTTCGGGGACAAACTCCTTCCCTTCTGGGGTAAGGGTGCCCCTGCGCTGGGCCAAAAGTTTCTGATAAACCAGGCCAAGGTCCCTGAGACCACCCACCACTTCAAGAATGGAACCGTTGAGAGCAAGAAATCAGAGCCCTTATTTGCCATGGCTTCCCTTGTCTACTTCCAGTTCACTTTTGCTGCTATCACGCTTATCTTGTTGGCTGGGTCGGTTCTTGGGAGGATGAACATTAGGGCTTGGATGGCTTTTGTGCCTCTTTGGCTTGTTTTTTCTTACACTGTTGGGGCTTTTAGTCTCTGGGGTGGTGGCTTTCTCTACCATTGGGGGGTCATTGATTACTCTGGAGGCTATGTTATTCATCTTTCTTCTGGAGTTGCTGGCTTCACTGCTGCTTACTGGGTTGGGCCAAGGTTGAAGAGTGACAGGGAGAGGTTCCCACCAAACAATGTGTTGCTGATGCTTGCGGGTGCTGGGTTGCTGTGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGCAGCCAACATTGATGCTTCCATTGCTGTGCTCAACACCAACATTTGTGCAGCCACTAGCCTCCTTGTTTGGACCTCTCTGGATGTCATCTTTTTCAGCAAACCATCTGTTATTGGAGCTGTTCAGGGCATGATGACTGGACTCGTTTGCATCACCCCAGGAGCAGGGCTTGTGCAATCTTGGGCAGCTATAGTGATGGGAATACTTTCAGGGAGCATTCCATGGATGACTATGATGATCCTCCACAAGAAGTCAAACCTACTACAGAAGGTAGATGATGCTCTAGGAGTATTTCATACACATGCAGTGGCTGGCCTATTGGGTGGTCTCCTCACAGGTCTCTTAGCAGAACCTGAGCTTTGTAGTCTCATATTGCCGGTGAGTAACTCAAGGGGTGCCTTCTATGGTGGTAGTGGTGGTGTTCAGTTTTTGAAGCAATTGGTGGCAGCATGTTTCATCACAGGATGGAACTTGGTCTCCACCACACTCATTCTTCTAGCCATACAGTTCTTCATACCCTTGAGAATGCCGGACGATCAACTTGAGATCGGTGACGATGCTGTCCACGGCGAAGAAGCCTATGCCCTTTGGGGTGATGGTGAAAAATATGATCCAACCAGGCATGGATCCTCTATAGTTGATAAAACTTCCCCATCTCCCTATGTTAATGGAGCAAGGGGTTTGACCATAGACTTATGA 1461 0.499 MAIAPAYEEHLPASPSWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLLCYRMAFGDKLLPFWGKGAPALGQKFLINQAKVPETTHHFKNGTVESKKSEPLFAMASLVYFQFTFAAITLILLAGSVLGRMNIRAWMAFVPLWLVFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGVAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIDASIAVLNTNICAATSLLVWTSLDVIFFSKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWMTMMILHKKSNLLQKVDDALGVFHTHAVAGLLGGLLTGLLAEPELCSLILPVSNSRGAFYGGSGGVQFLKQLVAACFITGWNLVSTTLILLAIQFFIPLRMPDDQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSSIVDKTSPSPYVNGARGLTIDL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00054 486 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Phacun635g00054 486 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Phacun635g00054 486 PANTHER AMMONIUM TRANSPORTER MEP2 9 458 IPR001905 GO:0008519|GO:0016020|GO:0072488
Phacun635g00054 486 Gene3D Ammonium transporter AmtB like domains 4 451 IPR029020 -
Phacun635g00054 486 FunFam Ammonium transporter 6 451 - -
Phacun635g00054 486 NCBIfam ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Phacun635g00054 486 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005886
Phacun635g00054 486 PRINTS Rhesus blood group protein signature 356 372 IPR002229 GO:0005886
Phacun635g00054 486 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005886
Phacun635g00054 486 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005886
Phacun635g00054 486 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005886
Phacun635g00054 486 SUPERFAMILY Ammonium transporter 17 430 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00054 130 486 Inorganic Solute Cotransporters AT2G38290 76.602 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00054 K03320 - gmx:100798599 887.871