Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00045 ATGCTTCAACATAAAGAACTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAATGATGTAAAAAATGCTATTAATACATACAGCTCACTTGGGCCGCTGGATAGTCTTCCACATGGCTGCTTTGGTCAGAAGAATACAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCACTTACTGCTACATCTACAACGAGTGGCACTGAAGACCCTAGTTCCCAGACTCTAAGGAAAAATAATTCCTACTGCAAAGATAAGGAAACACTTTCCTCAATTTTAGATGATGCCAACTTAGAGTCAAAGGAAGTAGAAGGCCAAGAAGTTGGCTCTGCTGATTACCATGCCAATCAAGTTTGTCTGGATGATATTTCCACTCTGGCATTTCCCTCTATTTCAACATCTGATTTCCAATTCAACCTTGAGAAGGCAGCTGATATTATTATCGAGAAGGTTATGGAGTTCTCAAATAAGTTTAGGAATGCCAGACTTGTTCTTGTTGACTTGTCTCACAAGTCAAAGATTCTTTCCTTAGTTAAAGCCAGAGTCGTGGAAAAAAACATGGACACCCAAAAGTTTTTTACCCATGTTGGGGACATTACTCATCTTTATTCCAGGGGAGGTTTGCGATGTAATGTCATTGCTAATGCTGCCAACTGGAGGTTGAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAATGCTGCAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTAAAATCTCTTTCGCCTGGGAATGCTGCTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTATCTAAATAATGATTATAATAAAGGCTGCAAAATTCTCCAAGATGCTTATACTTCACTTTTTGAAGGTTTTGCATCTATTGTGATGAACCAGCCAGGGATACCAGTGGGAAAAAGTGAAAACCTTGAAAGGAAGTCTTTGGAGTTGCCGGTTCGGTCTGATTGTTCTTCCAGAAAATATTTTACAAGTACTGATCAAAAGAGTAAGAGAGGTGATGATCATGGATCAGAGCAAAGCAAGAAATGCAAGCGAAATCAGGATGGCTTAGGATTGGCCTTTACTAATTCTAAGGATGAAAAGGTAGATTCAGAGCATACAAGAACTGAGAGGAGCAGGAGTAAGGCTTGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCTAAACAGCAAAAGGGTGACTTGCTTGAAATTTCCGATGATGTTGTTGTATTGAATGATATGTATCCAAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAATTGGGGGTCTTGACTGCCTCGCTGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGATGTGGGTTTAAAGTGGGCAGAGAAGTTCTTGAACGAGAATGCTTCTCTGGTATTTCGACTAGGATATCACTCGGCACCATCGATGCGACAACTACATTTACATGTTATTAGCCAGGACTTTGAATCAACACAATTAAAGAATAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCGGTTGATGTAATGGATGAGATCTCTAGTGATGGGAAGGCAACATTGAAAGATGATGACAAGCTACTCTCTATGGAGTTGAGGTGCCACAGATGTAGAAGTGCCCATCCAAACATACCCCGGTTAAAATCTCATATCAGCAGCTGTCAATCCCCCTTTCCTGCTTACCTACTTCAGAATGGACGTTTAGTGAATGCTCCGGGGGAACCTCGCAACAGTGTCCCGTAG 1875 0.4128 MLQHKELPKLSEGFNRITFCQNENDVKNAINTYSSLGPLDSLPHGCFGQKNTDSKIQVGIMKFLKKAEVPLTATSTTSGTEDPSSQTLRKNNSYCKDKETLSSILDDANLESKEVEGQEVGSADYHANQVCLDDISTLAFPSISTSDFQFNLEKAADIIIEKVMEFSNKFRNARLVLVDLSHKSKILSLVKARVVEKNMDTQKFFTHVGDITHLYSRGGLRCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYNKGCKILQDAYTSLFEGFASIVMNQPGIPVGKSENLERKSLELPVRSDCSSRKYFTSTDQKSKRGDDHGSEQSKKCKRNQDGLGLAFTNSKDEKVDSEHTRTERSRSKAWGSWAQALHQIAMHPKQQKGDLLEISDDVVVLNDMYPKAQKHVLVLARIGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNENASLVFRLGYHSAPSMRQLHLHVISQDFESTQLKNKKHWNSFNTAFFRDSVDVMDEISSDGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQSPFPAYLLQNGRLVNAPGEPRNSVP* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00045 624 ProSiteProfiles Macro domain profile. 191 371 IPR002589 -
Phacun635g00045 624 Gene3D - 420 601 IPR036265 -
Phacun635g00045 624 MobiDBLite consensus disorder prediction 360 416 - -
Phacun635g00045 624 MobiDBLite consensus disorder prediction 73 92 - -
Phacun635g00045 624 Gene3D Leucine Aminopeptidase, subunit E, domain 1 85 183 IPR043472 -
Phacun635g00045 624 SUPERFAMILY Macro domain-like 131 182 IPR043472 -
Phacun635g00045 624 MobiDBLite consensus disorder prediction 73 91 - -
Phacun635g00045 624 FunFam aprataxin isoform X2 419 599 - -
Phacun635g00045 624 PANTHER APRATAXIN-RELATED 138 598 - -
Phacun635g00045 624 MobiDBLite consensus disorder prediction 399 414 - -
Phacun635g00045 624 SUPERFAMILY HIT-like 418 582 IPR036265 -
Phacun635g00045 624 MobiDBLite consensus disorder prediction 365 386 - -
Phacun635g00045 624 SMART YBR022w_8 203 345 IPR002589 -
Phacun635g00045 624 ProSitePatterns HIT domain signature. 507 525 IPR019808 -
Phacun635g00045 624 Gene3D Leucine Aminopeptidase, subunit E, domain 1 184 332 IPR043472 -
Phacun635g00045 624 Pfam Macro domain 226 309 IPR002589 -
Phacun635g00045 624 Pfam Scavenger mRNA decapping enzyme C-term binding 430 538 - -
Phacun635g00045 624 Pfam C2HE / C2H2 / C2HC zinc-binding finger 543 596 IPR032566 -
Phacun635g00045 624 FunFam Transcription factor bHLH140 184 331 - -
Phacun635g00045 624 SUPERFAMILY Macro domain-like 184 331 IPR043472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00045 1 613 C2H2 Transcription Factor Family AT5G01310 57.236 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00045 K10863 - gmx:100786762 1059.28