Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00044 ATGGACATGATGGACGAGGATGAAACTTCTGCACCCAGAGAGGGGAAGCCCGTTTTGGTGATCCTGGTTGGAGCACCTGGAAGTGGCAAATCCACCTTCGGTGAAGATGTAATGCGTTCCTCTACTCGCCACTGGGTTCGCGTTTGCCAGGACACTATTGGAAATGGTAAAGCAGGAACTAAAGCTCAATGCCTAAGCAGTGCAACTAGTGCGTTGAAGGATGGGAAGAGTGTATTTATTGATAGGTGCAATCTTAACAGAGAACAGCGGTCAGAATTTATAAAGCTTGATGGTGGACTCCAAATAGATGTCCATGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCAGTCAAACGAACTGGGCATGAAGGAAATTTACAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAACATAAAGAACTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAATGATGTAAAAAATGCTATTAATACATACAGCTCACTTGGGCCGCTGGATAGTCTTCCACATGGCTGCTTTGGTCAGAAGAATACAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCACTTACTGCTACATCTACAACGAGTGGCACTGAAGACCCTAGTTCCCAGACTCTAAGGAAAAATAATTCCTACTGCAAAGATAAGGAAACACTTTCCTCAATTTTAGATGATGCCAACTTAGAGTCAAAGGAAGTAGAAGGCCAAGAAGTTGGCTCTGCTGATTACCATGCCAATCAAGTTTGTCTGGATGATATTTCCACTCTGGCATTTCCCTCTATTTCAACATCTGATTTCCAATTCAACCTTGAGAAGGCAGCTGATATTATTATCGAGAAGGTTATGGAGTTCTCAAATAAGTTTAGGAATGCCAGACTTGTTCTTGTTGACTTGTCTCACAAGTCAAAGATTCTTTCCTTAGTTAAAGCCAGAGTCGTGGAAAAAAACATGGACACCCAAAAGTTTTTTACCCATGTTGGGGACATTACTCATCTTTATTCCAGGGGAGGTTTGCGATGTAATGTCATTGCTAATGCTGCCAACTGGAGGTTGAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAATGCTGCAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTAAAATCTCTTTCGCCTGGGAATGCTGCTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTATCTAAATAATGATTATAATAAAGGCTGCAAAATTCTCCAAGATGCTTATACTTCACTTTTTGAAGGTTTTGCATCTATTGTGATGAACCAGCCAGGGATACCAGTGGGAAAAAGTGAAAACCTTGAAAGGAAGTCTTTGGAGTTGCCGGTTCGGTCTGATTGTTCTTCCAGAAAATATTTTACAAGTACTGATCAAAAGAGTAAGAGAGGTGATGATCATGGATCAGAGCAAAGCAAGAAATGCAAGCGAAATCAGGATGGCTTAGGATTGGCCTTTACTAATTCTAAGGATGAAAAGGTAGATTCAGAGCATACAAGAACTGAGAGGAGCAGGAGTAAGGCTTGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCTAAACAGCAAAAGGGTGACTTGCTTGAAATTTCCGATGATGTTGTTGTATTGAATGATATGTATCCAAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAATTGGGGGTCTTGACTGCCTCGCTGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGATGTGGGTTTAAAGTGGGCAGAGAAGTTCTTGAACGAGAATGCTTCTCTGGTATTTCGACTAGGATATCACTCGGTATGA 1965 0.4168 MDMMDEDETSAPREGKPVLVILVGAPGSGKSTFGEDVMRSSTRHWVRVCQDTIGNGKAGTKAQCLSSATSALKDGKSVFIDRCNLNREQRSEFIKLDGGLQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFNRITFCQNENDVKNAINTYSSLGPLDSLPHGCFGQKNTDSKIQVGIMKFLKKAEVPLTATSTTSGTEDPSSQTLRKNNSYCKDKETLSSILDDANLESKEVEGQEVGSADYHANQVCLDDISTLAFPSISTSDFQFNLEKAADIIIEKVMEFSNKFRNARLVLVDLSHKSKILSLVKARVVEKNMDTQKFFTHVGDITHLYSRGGLRCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYNKGCKILQDAYTSLFEGFASIVMNQPGIPVGKSENLERKSLELPVRSDCSSRKYFTSTDQKSKRGDDHGSEQSKKCKRNQDGLGLAFTNSKDEKVDSEHTRTERSRSKAWGSWAQALHQIAMHPKQQKGDLLEISDDVVVLNDMYPKAQKHVLVLARIGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNENASLVFRLGYHSV* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00044 654 PANTHER APRATAXIN-RELATED 279 654 - -
Phacun635g00044 654 Gene3D Leucine Aminopeptidase, subunit E, domain 1 326 473 IPR043472 -
Phacun635g00044 654 MobiDBLite consensus disorder prediction 214 233 - -
Phacun635g00044 654 SMART YBR022w_8 344 486 IPR002589 -
Phacun635g00044 654 MobiDBLite consensus disorder prediction 501 557 - -
Phacun635g00044 654 Pfam Macro domain 367 450 IPR002589 -
Phacun635g00044 654 FunFam Transcription factor bHLH140 6 176 - -
Phacun635g00044 654 Pfam AAA domain 19 145 - -
Phacun635g00044 654 Pfam Scavenger mRNA decapping enzyme C-term binding 571 653 - -
Phacun635g00044 654 SUPERFAMILY Macro domain-like 272 323 IPR043472 -
Phacun635g00044 654 FunFam Transcription factor bHLH140 325 472 - -
Phacun635g00044 654 Gene3D - 557 654 IPR036265 -
Phacun635g00044 654 ProSiteProfiles Macro domain profile. 332 654 IPR002589 -
Phacun635g00044 654 Gene3D - 2 176 IPR027417 -
Phacun635g00044 654 SUPERFAMILY HIT-like 552 653 IPR036265 -
Phacun635g00044 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 163 IPR027417 -
Phacun635g00044 654 SUPERFAMILY Macro domain-like 325 472 IPR043472 -
Phacun635g00044 654 MobiDBLite consensus disorder prediction 540 555 - -
Phacun635g00044 654 Gene3D Leucine Aminopeptidase, subunit E, domain 1 230 325 IPR043472 -
Phacun635g00044 654 MobiDBLite consensus disorder prediction 506 527 - -
Phacun635g00044 654 MobiDBLite consensus disorder prediction 214 232 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00044 14 654 C2H2 Transcription Factor Family AT5G01310 57.854 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00044 K10863 - gmx:100786762 1089.33