Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00043 ATGCTTCAACATAAAGAACTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAATGATGTAAAAAATGCTATTAATACATACAGCTCACTTGGGCCGCTGGATAGTCTTCCACATGGCTGCTTTGGTCAGAAGAATACAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCACTTACTGCTACATCTACAACGAGTGGCACTGAAGACCCTAGTTCCCAGACTCTAAGGAAAAATAATTCCTACTGCAAAGATAAGGAAACACTTTCCTCAATTTTAGATGATGCCAACTTAGAGTCAAAGGAAGTAGAAGGCCAAGAAGTTGGCTCTGCTGATTACCATGCCAATCAAGTTTGTCTGGATGATATTTCCACTCTGGCATTTCCCTCTATTTCAACATCTGATTTCCAATTCAACCTTGAGAAGGCAGCTGATATTATTATCGAGAAGGTTATGGAGTTCTCAAATAAGTTTAGGAATGCCAGACTTGTTCTTGTTGACTTGTCTCACAAGTCAAAGATTCTTTCCTTAGTTAAAGCCAGAGTCGTGGAAAAAAACATGGACACCCAAAAGTTTTTTACCCATGTTGGGGACATTACTCATCTTTATTCCAGGGGAGGTTTGCGATGTAATGTCATTGCTAATGCTGCCAACTGGAGGTTGAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAATGCTGCAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTAAAATCTCTTTCGCCTGGGAATGCTGCTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTATCTAAATAATGATTATAATAAAGGCTGCAAAATTCTCCAAGATGCTTATACTTCACTTTTTGAAGGTTTTGCATCTATTGTGATGAACCAGCCAGGGATACCAGTGGGAAAAAGTGAAAACCTTGAAAGGAAGTCTTTGGAGTTGCCGGTTCGGTCTGATTGTTCTTCCAGAAAATATTTTACAAGTACTGATCAAAAGAGTAAGAGAGGTGATGATCATGGATCAGAGCAAAGCAAGAAATGCAAGCGAAATCAGGATGGCTTAGGATTGGCCTTTACTAATTCTAAGGATGAAAAGGTAGATTCAGAGCATACAAGAACTGAGAGGAGCAGGAGTAAGGCTTGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCTAAACAGCAAAAGGGTGACTTGCTTGAAATTTCCGATGATGTTGTTGTATTGAATGATATGTATCCAAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAATTGGGGGTCTTGACTGCCTCGCTGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGATGTGGGTTTAAAGTGGGCAGAGAAGTTCTTGAACGAGAATGCTTCTCTGGTATTTCGACTAGGATATCACTCGGTATGA 1542 0.4053 MLQHKELPKLSEGFNRITFCQNENDVKNAINTYSSLGPLDSLPHGCFGQKNTDSKIQVGIMKFLKKAEVPLTATSTTSGTEDPSSQTLRKNNSYCKDKETLSSILDDANLESKEVEGQEVGSADYHANQVCLDDISTLAFPSISTSDFQFNLEKAADIIIEKVMEFSNKFRNARLVLVDLSHKSKILSLVKARVVEKNMDTQKFFTHVGDITHLYSRGGLRCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYNKGCKILQDAYTSLFEGFASIVMNQPGIPVGKSENLERKSLELPVRSDCSSRKYFTSTDQKSKRGDDHGSEQSKKCKRNQDGLGLAFTNSKDEKVDSEHTRTERSRSKAWGSWAQALHQIAMHPKQQKGDLLEISDDVVVLNDMYPKAQKHVLVLARIGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNENASLVFRLGYHSV* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00043 513 SUPERFAMILY Macro domain-like 184 331 IPR043472 -
Phacun635g00043 513 PANTHER APRATAXIN-RELATED 138 513 - -
Phacun635g00043 513 SUPERFAMILY Macro domain-like 131 182 IPR043472 -
Phacun635g00043 513 ProSiteProfiles Macro domain profile. 191 513 IPR002589 -
Phacun635g00043 513 MobiDBLite consensus disorder prediction 360 416 - -
Phacun635g00043 513 MobiDBLite consensus disorder prediction 73 92 - -
Phacun635g00043 513 Gene3D - 416 513 IPR036265 -
Phacun635g00043 513 MobiDBLite consensus disorder prediction 73 91 - -
Phacun635g00043 513 Gene3D Leucine Aminopeptidase, subunit E, domain 1 83 175 IPR043472 -
Phacun635g00043 513 Gene3D Leucine Aminopeptidase, subunit E, domain 1 176 331 IPR043472 -
Phacun635g00043 513 Pfam Macro domain 226 309 IPR002589 -
Phacun635g00043 513 MobiDBLite consensus disorder prediction 399 414 - -
Phacun635g00043 513 MobiDBLite consensus disorder prediction 365 386 - -
Phacun635g00043 513 SMART YBR022w_8 203 345 IPR002589 -
Phacun635g00043 513 Pfam Scavenger mRNA decapping enzyme C-term binding 429 512 - -
Phacun635g00043 513 SUPERFAMILY HIT-like 411 512 IPR036265 -
Phacun635g00043 513 FunFam Transcription factor bHLH140 184 331 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00043 1 513 C2H2 Transcription Factor Family AT5G01310 54.369 2.08e-179 519