Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00033 ATGGAGTTTGATCCATGCTTCCTTTCAAGTATTTTTCCCAAAAACCCCTACTTGAAGCCACGCACTCATCAAAACATGTTTCCATCCCAAAGCTCCTTTCTTTTCCCACCATCCCAACCCATCATGTTTCACCCTAACCATGCTTTCTACCATTTTCAAGACCACATCGTGAATGTGCCTGCCCACAACCCCATCACAGCCCCCATGTATGGTAATGGGATACCAACCCCTTCTTTGGGGGATGATGGGTCTTCCCTAACAGGCTTTGTTAACATTAACAGTCACCAGCCTGTAATGTTAGCACCAAAGAACAACAACAAAATTGAAGCTTTGTATGACCACCATAAAGGCAAAGTCATATGGGATTTTTCCCAGAAAACCATGGTTCATCCCTTTGAAGCCTCTTCTTCCAAATCGCCATCTCCTTTCTGTCTCTCTAATGAGTATGGATTGGGTATGAGTGAATTTCACAGGGACACTGATCCAAGGATGGTAGAGGTGGAAAAGAATATGAACAGTAATATAATCAAAGGGCAGTGGACTCCCGAAGAAGACAGTGCTCTTGTGGAGTTGGTGAATCAATTTGGGCCAAAGAAATGGTCAGAAATTGCAAAGCTGATGAGCCGTAGAGTTGGAAAGCAATGTCGAGAAAGATGGCACAATCATCTCCGGCCAAACATTAGGAAGGAGTCGTGGAGCCAGGAAGAAGACATGATTCTGATCAAAGCCCACCAGGAATTTGGAAATAGGTGGTCAGAGATTGCGAAGAGGCTACCTGGAAGGACTGAAAATACTATTAAGAACCATTGGAATGGAACCAAGCGACGCCAGAGTTACAAGACATACAACAGGAATAAGAACAACCCTTACGAAGGATCAATGCTCCGTGCTTATGTTAAAAGGGTCACTGCAACTGAAGAATCTACAAAAGTGTTCAAGAAACCCTTAAGGAAAAAGAATAAGAAGGTGTTGAGATCTAATCGTGATGGGCTAGAACCTTTGTTGAGGTTTGATCGAAGTACAAACGAAATGTTTACTGGAAATGGCAGCAACTACGCGCCAATGCAAGTTAAAAATAATGATGTTGGGGTTTCCTGTGCAATTGGAAAGAATGCAATGAACAAGGGAATGAATCCGATAAGTGCAACATACTGA 1155 0.4294 MEFDPCFLSSIFPKNPYLKPRTHQNMFPSQSSFLFPPSQPIMFHPNHAFYHFQDHIVNVPAHNPITAPMYGNGIPTPSLGDDGSSLTGFVNINSHQPVMLAPKNNNKIEALYDHHKGKVIWDFSQKTMVHPFEASSSKSPSPFCLSNEYGLGMSEFHRDTDPRMVEVEKNMNSNIIKGQWTPEEDSALVELVNQFGPKKWSEIAKLMSRRVGKQCRERWHNHLRPNIRKESWSQEEDMILIKAHQEFGNRWSEIAKRLPGRTENTIKNHWNGTKRRQSYKTYNRNKNNPYEGSMLRAYVKRVTATEESTKVFKKPLRKKNKKVLRSNRDGLEPLLRFDRSTNEMFTGNGSNYAPMQVKNNDVGVSCAIGKNAMNKGMNPISATY* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00033 384 Gene3D - 230 291 - -
Phacun635g00033 384 SMART sant 176 225 IPR001005 -
Phacun635g00033 384 SMART sant 228 276 IPR001005 -
Phacun635g00033 384 FunFam Transcriptional activator Myb isoform A 176 229 - -
Phacun635g00033 384 ProSiteProfiles Myb-like domain profile. 172 223 IPR001005 -
Phacun635g00033 384 Gene3D - 176 228 - -
Phacun635g00033 384 CDD SANT 180 223 IPR001005 -
Phacun635g00033 384 CDD SANT 231 271 IPR001005 -
Phacun635g00033 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 228 278 IPR017930 -
Phacun635g00033 384 SUPERFAMILY Homeodomain-like 174 270 IPR009057 -
Phacun635g00033 384 ProSiteProfiles Myb-like domain profile. 224 274 IPR001005 -
Phacun635g00033 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 172 227 IPR017930 -
Phacun635g00033 384 Pfam Myb-like DNA-binding domain 180 237 - -
Phacun635g00033 384 PANTHER MYB PROTEIN-RELATED 149 291 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00033 173 302 MYB Transcription Factor Family AT4G18770 60.000 2.82e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phacun635g00033 Myb_DNA-bind_6 3.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00033 K09422 - vra:106773360 495.738