Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phacun635g00013 | ATGGAGAAGCACAAGTGCAAGCTTTGCTTCAGGAGTTTCGCCAATGGAAGAGCTTTAGGAGGTCACATGAGGTCTCACATGATGAACCTACCTGTTCCTCCGAAAGAGAGCGAGTTCGTCCCGGTTCAACTCAGTTTTGAGGCCGATTCATCCCCTTCTCAATCCTCTTCTTCCTTCTACGGTCTCAGAGAGAACCCCAAAAAAAGTTTCCGTTTTGCAGATCCTGAATTCTCGTTCGCAGCAGAAACGGGCTCCGTGATCCTCCAAGATAGAGAGAGCGAGACCGAGTCATCCAAGAACCCAACTCGGAAACGATCCAAGAGAGCTTGGCAACTCGGAGAACCCCTGAAAAAAATGAAACTCTTTGAAAATAATAACAAGAACGAATCTGCAAGTTCTGCTTCCGATACCACCACGGAGGAAGCCGTGGCATTTTGTCTAATGATGCTGTCTCGTGACAGATGGAAGAAGTATGATGATCATAAAAACATACAACAGTATGATGATGAGGTTGAAGATGATGGTGACAACGATGATGAAGATGAAGAAGAGGATGATGAAGAAAAAGATGGTTTTGAATTCGAGGAGATGAAATCTGTAAAGAGGAGTAACAAGGTGCGAGGGAGGTACAAATGTGAAACGTGTGATAAGGTGTTTCGATCTTACCAAGCTCTTGGTGGGCACAGAGCAAGTCACAAGAAAATGAAGTTAAACTCTGAAATGGAGTTTCAGAAGACTGAACCTGAATTGGAGCATGTTGCTGTGGCGGAGAAGAAAGTCCACGAATGCCCCGTTTGCTCTAGAGTCTTTGGTTCGGGTCAAGCCCTCGGTGGACACAAGAGAACACATGTTATAGGTTCTTCTGCAACTACTACCACCGCAACTGTCAGAACTTCTGCAAATGTCAGAAGAACTTCTGCAACTGTTTCGGTTGGAGCTTCTGCTAGAGTTGGAGACAGTTTGATAGATCTTAATCTCCCTGCTCCAGTGGATGATGATGAAGACATTAGCCAGTTCGATCACTCCGCTCTTTCGGATGCAGAGTTTGTCAAACAGTGA | 1059 | 0.4533 | MEKHKCKLCFRSFANGRALGGHMRSHMMNLPVPPKESEFVPVQLSFEADSSPSQSSSSFYGLRENPKKSFRFADPEFSFAAETGSVILQDRESETESSKNPTRKRSKRAWQLGEPLKKMKLFENNNKNESASSASDTTTEEAVAFCLMMLSRDRWKKYDDHKNIQQYDDEVEDDGDNDDEDEEEDDEEKDGFEFEEMKSVKRSNKVRGRYKCETCDKVFRSYQALGGHRASHKKMKLNSEMEFQKTEPELEHVAVAEKKVHECPVCSRVFGSGQALGGHKRTHVIGSSATTTTATVRTSANVRRTSATVSVGASARVGDSLIDLNLPAPVDDDEDISQFDHSALSDAEFVKQ* | 353 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phacun635g00013 | 352 | MobiDBLite | consensus disorder prediction | 92 | 110 | - | - | |
| Phacun635g00013 | 352 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 263 | 283 | IPR013087 | - | |
| Phacun635g00013 | 352 | MobiDBLite | consensus disorder prediction | 169 | 192 | - | - | |
| Phacun635g00013 | 352 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 31 | IPR036236 | - | |
| Phacun635g00013 | 352 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 212 | 232 | IPR013087 | - | |
| Phacun635g00013 | 352 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 261 | 283 | IPR013087 | - | |
| Phacun635g00013 | 352 | MobiDBLite | consensus disorder prediction | 165 | 196 | - | - | |
| Phacun635g00013 | 352 | SUPERFAMILY | beta-beta-alpha zinc fingers | 209 | 283 | IPR036236 | - | |
| Phacun635g00013 | 352 | SMART | c2h2final6 | 261 | 283 | IPR013087 | - | |
| Phacun635g00013 | 352 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
| Phacun635g00013 | 352 | SMART | c2h2final6 | 210 | 232 | IPR013087 | - | |
| Phacun635g00013 | 352 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
| Phacun635g00013 | 352 | MobiDBLite | consensus disorder prediction | 119 | 138 | - | - | |
| Phacun635g00013 | 352 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 210 | 237 | IPR013087 | - | |
| Phacun635g00013 | 352 | MobiDBLite | consensus disorder prediction | 84 | 110 | - | - | |
| Phacun635g00013 | 352 | Gene3D | Classic Zinc Finger | 207 | 283 | - | - | |
| Phacun635g00013 | 352 | Pfam | C2H2-type zinc finger | 209 | 234 | - | - | |
| Phacun635g00013 | 352 | Pfam | C2H2-type zinc finger | 4 | 27 | - | - | |
| Phacun635g00013 | 352 | Pfam | C2H2-type zinc finger | 260 | 283 | - | - | |
| Phacun635g00013 | 352 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 31 | IPR013087 | - | |
| Phacun635g00013 | 352 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 351 | IPR044303 | GO:0006355 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phacun635g00013 | 1 | 334 | C2H2 Transcription Factor Family | AT3G60580 | 44.606 | 8.10e-76 | 234 |
Transcription factors information