Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00007 ATGTGGACAACAACTCCATTCCCACACCCACAAAGTTCTCTCTTCTTTCCACCTCCAATTTCACAGCCCATGAAGTCCCAAAGTAAATTTCTGCTCAAATTTCATTCCTTTTACAGCTCAAAACTATGCCATCTATTACTCTTAATTGTGGAAGATGAATTCTTTGAATTGTATTATAGGTTGGGCTACAAAGTGGCATGCAAGAAGGGACAACCTTCGACCCCTGAAGACAGCCCTGGGAGGAACCAAACAACATGGGACATACCTCGTACAAGTGGAACCTTGGAGTCCATAGTGAACCATCGTATCGGCAAAAACTGCCACAAGTCAGTTACTAAGGACGCCTTAGTGCCCTGTTTTCCCAAACAGAGCACAATGTTTGGCGCGTGCAAAAAGGTTTACTCTAGGCGCGTGGACACTGGAGCTGGGGTGGTGGCGCGTGGTCCCACAACGCATGAGTTGAGTGGCGGCAAGGACTCGAATGTGAGTGGTAGTGACACTTATCCAAGGGAGTTGAGCGTGACTTTCAATTCAGACATCATGGGTTGCCCGGAAAACACCTGTAGCTCTGGTAAGCAGTGTACGGAGACCACTGCCATGGACGACCGTGATTCCGTAAGCCACCGTAGGTCGCAGAGTGAGGCAGGAGAAGAGGATTGCAAGAGAAGTGGAGTTGATAGATATTGTGAATCCAACAAAAGAATAAAAGCTTCAGCTGTACACAACCAATCTGAAAGGAGAAGGAGAGATAAGATCAACCAAAGAATGAAGGAATTGCAAAAACTGGTCCCTAATTCCAGCAAGCAGACCGATAAAGCTTCGATGTTGGATGAGGTGATCCAATATATGAAGCAACTGCAAGCACATTTGCAAATGATGAATTGGATGAAAATGTACTCGTCGATTATGCTGCCAATTGCCATGCAACAACAACAGCTTAAAATGTCGATGATGATGACTCAAATGGGCATTGGAATGAGAATGAGTAAGGAAATGACTATGAATATGAACAACATTAACATTCCCTCTATTCCTCCCATGCTCCACCTTCCTCCTTTCATGCCTATGGCTTCATGTGGTGATCAATTACTAGGAGAACCAGCAAAGTCAGTGACAGTGGATGCATACAGTAAGATGGCTGCTCTGTATAATCAGATGTATCATTCTCCATATTCTACCTCCAAGAAATGA 1191 0.4467 MWTTTPFPHPQSSLFFPPPISQPMKSQSKFLLKFHSFYSSKLCHLLLLIVEDEFFELYYRLGYKVACKKGQPSTPEDSPGRNQTTWDIPRTSGTLESIVNHRIGKNCHKSVTKDALVPCFPKQSTMFGACKKVYSRRVDTGAGVVARGPTTHELSGGKDSNVSGSDTYPRELSVTFNSDIMGCPENTCSSGKQCTETTAMDDRDSVSHRRSQSEAGEEDCKRSGVDRYCESNKRIKASAVHNQSERRRRDKINQRMKELQKLVPNSSKQTDKASMLDEVIQYMKQLQAHLQMMNWMKMYSSIMLPIAMQQQQLKMSMMMTQMGIGMRMSKEMTMNMNNINIPSIPPMLHLPPFMPMASCGDQLLGEPAKSVTVDAYSKMAALYNQMYHSPYSTSKK* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00007 396 MobiDBLite consensus disorder prediction 154 168 - -
Phacun635g00007 396 SMART finulus 242 292 IPR011598 GO:0046983
Phacun635g00007 396 CDD bHLH_AtPIF_like 236 299 IPR047265 -
Phacun635g00007 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 236 286 IPR011598 GO:0046983
Phacun635g00007 396 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 124 389 IPR031066 -
Phacun635g00007 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 238 302 IPR036638 GO:0046983
Phacun635g00007 396 Coils Coil 242 262 - -
Phacun635g00007 396 MobiDBLite consensus disorder prediction 146 168 - -
Phacun635g00007 396 MobiDBLite consensus disorder prediction 70 89 - -
Phacun635g00007 396 MobiDBLite consensus disorder prediction 188 224 - -
Phacun635g00007 396 Gene3D - 231 297 IPR036638 GO:0046983
Phacun635g00007 396 MobiDBLite consensus disorder prediction 197 224 - -
Phacun635g00007 396 Pfam Helix-loop-helix DNA-binding domain 240 287 IPR011598 GO:0046983
Phacun635g00007 396 MobiDBLite consensus disorder prediction 75 89 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00007 93 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 44.255 1.11e-34 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phacun635g00007 HLH 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00007 - - gmx:100820284 377.867