Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun635g00004 ATGCATTGCTACAATATAGATATTACTCTGATGAAGCGAGTACAATTCATCGCATTCCTATCGCTTTGTTTTGTTTTTTATTGTCCATTCCTAGTGATCTCAATAAATCCTTCTTTCAACGATGATATGTTGGGGTTGATTATGTTCAAGGCTGGTCTAGAAGATCCAAAAGGAAAACTCTCTACGTGGAATGAAGATGATTATAGTCCCTGCAACTGGGTTGGTGTCAAATGTGATCCTGTTAACAATAGGGTGTCTTCTCTTGTTCTTGATGGATTCTCGCTTTCTGGTCACATTGATAGAGGCCTTTTGGGGCTGCAGTTCCTTCAGATTCTGTCCCTTTCTAGGAACAACATCACAGGGACCATTGCTCCTGACCTTCTCGGCAATGGTAATTTACAAGTTGTTGATTTGAGTGAGAACAACCTCTCTGGGCTAATTCCAAATGAGATTTTCCAGCAATGTTGGTCTCTGAGAGTGATATCATTTGCCAACAACAACCTCACAGGTAAAATTCCTGATTCTTTGAGCTCCTGCTACTCTTTGGCAGTTGTGAACTTTTCCTCTAATCAGATACATGGGGAACTACCATCTGGAATGTGGTTTTTGAGGGGACTACAATCAATTGATCTTTCAAACAACTTGCTGGAGGGAGAGATTCCAGAAGGAATTCGGAATCTGATTGATTTGAGGGAGTTGAGGCTAGGGAGGAACCTCTTCACTGGTAAGATTCCTGAGCATATTGGAGACTGCTTGCTTTTGAAGTTGGTTGATTTCAGTGGCAATTCTCTCTCTGGGAGACTTCCTGAGTCAATGCAAAAGCTCTCCTCATGCACATTCCTCAGCTTGCAAGGGAATTCATTCACAGGTGGCATTCCACATTGGATTGGAGAAATGAAAAGTCTAGATATATTGGATCTTTCTGCAAATAGATTTTCCGGTTGGATTCCAAAGTCAATAGGAAATCTTGACTTGCTGAGTAAGTTGAATCTTTCAAGGAATCAGATCACGGGAAACCTGCCAGAGTTGATGGTAAACTGCATTAAGCTTTTGACTCTTGACATGAGCCACAATCACTTGGCAGGCCATCTTCCTTCATGGATATTTAGGATGGGTTTACAAAGTATCTCTCTTTCTGGGAATAGCTTCAGTGAGGGAAATTATCCCTCACTTACTCCCATTCCTGTATCTTTTCACGGCCTTCAGGTTTTGGATTTGTCATCAAATGCATTTTTTGGCCAACTTCCATCTGGAATTGGAGGTCTTGGTAGCTTGCAAGTCTTGAATTTGTCCACCAACAATATCTCAGGTTCTATTCCTGTGAGTATAGGAGAACTTAAATCTTTGTACATTCTTGACCTAAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAAGGGGCAATATCACTCAGTGAAATCAGGCTACAAAAGAACTTCCTAAGTGGGAGAATTCCAGCCCAAATTGACAAGTGTTCAGAGCTAACATTTCTGAATTTATCTCACAACAAGCTTATTGGCTCAATCCCTTCAGCCATAGCAAACCTAACCAATCTTCAGGATGTGGATTTCTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGTTGACAAATCTTTCCAACCTTTTCTCGTTTAATGTTTCATACAACCACCTTCAAGGTGAGCTACCAGTGGGTGGCTTCTTCAATACCATCTCTCCTTCATCTGTCTCTGGTAATCCATTGTTATGTGGTTCTGTTGTTAATCACTCATGCCCTTCTGTTCATCCAAAGCCTATTGTGCTAAATCCCAATTCTTCTTACTCCAATCCTAGCTCTTCCTTACAAAACCATCACCATAAGATTATGCTCAGTATCTCTGTCCTTATTGCTATTGGTGCTGCTATTTTTATTGTCATTGGCGTGGTGGTTGTTACTGTTCTAAATATTCATGTGAGGTCTTCAATTTCTCTTTCTGCTGCTCCATTTATATTCTCTGGAGGTGAGGACTATAGCGGTTCACCAGGGAATGATCCAAAGTGTGGTAAGCTTGTGATGTTTTATGGTGATGCGGAATTTGCTGATGGTACTCATAATCTTCTTAACAAAGACAGTGAAATAGGTCGCGGTGGATTTGGAGTTGTTTATTGCACTGTCCTTAGAGATGGTCATTATGTTGCAATCAAGAAGCTTGCAGTATCCACCTTAACCAAGTCACAAGAAGACTTTGAGAGGGAGGTTAAGATGCTTGGGAAGATCAAGCATCAAAATCTTGTCGCACTTGAAGGTTATTATTGGACTCCATCCTTGCAGCTCTTAATTTATGAGTACCTAGCCAGAGGGAGTTTGCAAAAGCTTCTACATGATGATGATGATAGTAGCAAAAATACACTTTCTTGGAGAAAAAGGTTCAAGATCATTCTTGGAATTGCAAGAGGGTTGGCCTATTTGCACCAAATGGAGCTAATTCACTATAACTTAAAGTCAACAAATGTCTTCATAGATTGTTCTGATGAGCCAAAGATAGGAGACTTTGGCTTGGTGAGGCTACTGCCAATGCTAGATCCTTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGATACATGGCTCCTGAGTTTGCTTGCCGCACAGTCAAGATAACTGAGAAGTGTGACATATATAGCTTTGGAATTTTGGTTTTGGAGGTGGTGACAGGAAAAAGACCAGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACAAGGTGAGGAGTGCATTGGATGATGGCAAAGTGGAGCAATGTGTTGATGAAAATCTTAAGGGTAATTTTGCTGTAGAGGAAGCAGTTCCTGTGATAAAATTGGGGTTGGTTTGTGCATCACAAGTGCCCTCAAAGCGTCCAGATATGGCTGAGGTAATCAACATATTGGAGTTGATCCAATGCCCTTCTGAAGGACAAGAGGAAATACAATGA 2949 0.41 MHCYNIDITLMKRVQFIAFLSLCFVFYCPFLVISINPSFNDDMLGLIMFKAGLEDPKGKLSTWNEDDYSPCNWVGVKCDPVNNRVSSLVLDGFSLSGHIDRGLLGLQFLQILSLSRNNITGTIAPDLLGNGNLQVVDLSENNLSGLIPNEIFQQCWSLRVISFANNNLTGKIPDSLSSCYSLAVVNFSSNQIHGELPSGMWFLRGLQSIDLSNNLLEGEIPEGIRNLIDLRELRLGRNLFTGKIPEHIGDCLLLKLVDFSGNSLSGRLPESMQKLSSCTFLSLQGNSFTGGIPHWIGEMKSLDILDLSANRFSGWIPKSIGNLDLLSKLNLSRNQITGNLPELMVNCIKLLTLDMSHNHLAGHLPSWIFRMGLQSISLSGNSFSEGNYPSLTPIPVSFHGLQVLDLSSNAFFGQLPSGIGGLGSLQVLNLSTNNISGSIPVSIGELKSLYILDLSDNKLNGSIPSEIEGAISLSEIRLQKNFLSGRIPAQIDKCSELTFLNLSHNKLIGSIPSAIANLTNLQDVDFSWNELSGSLPKELTNLSNLFSFNVSYNHLQGELPVGGFFNTISPSSVSGNPLLCGSVVNHSCPSVHPKPIVLNPNSSYSNPSSSLQNHHHKIMLSISVLIAIGAAIFIVIGVVVVTVLNIHVRSSISLSAAPFIFSGGEDYSGSPGNDPKCGKLVMFYGDAEFADGTHNLLNKDSEIGRGGFGVVYCTVLRDGHYVAIKKLAVSTLTKSQEDFEREVKMLGKIKHQNLVALEGYYWTPSLQLLIYEYLARGSLQKLLHDDDDSSKNTLSWRKRFKIILGIARGLAYLHQMELIHYNLKSTNVFIDCSDEPKIGDFGLVRLLPMLDPCVLSSKIQSALGYMAPEFACRTVKITEKCDIYSFGILVLEVVTGKRPVEYMEDDVVVLCDKVRSALDDGKVEQCVDENLKGNFAVEEAVPVIKLGLVCASQVPSKRPDMAEVINILELIQCPSEGQEEIQ* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun635g00004 982 Gene3D Phosphorylase Kinase; domain 1 684 773 - -
Phacun635g00004 982 SMART LRR_sd22_2 203 226 - -
Phacun635g00004 982 SMART LRR_sd22_2 518 544 - -
Phacun635g00004 982 SMART LRR_sd22_2 299 325 - -
Phacun635g00004 982 SMART LRR_sd22_2 446 469 - -
Phacun635g00004 982 Pfam Protein kinase domain 698 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun635g00004 982 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Phacun635g00004 982 Gene3D Ribonuclease Inhibitor 39 317 IPR032675 -
Phacun635g00004 982 SUPERFAMILY RNI-like 315 567 - -
Phacun635g00004 982 CDD STKc_IRAK 703 971 - -
Phacun635g00004 982 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Phacun635g00004 982 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 40 318 - -
Phacun635g00004 982 Gene3D Transferase(Phosphotransferase) domain 1 774 980 - -
Phacun635g00004 982 ProSitePatterns Protein kinases ATP-binding region signature. 703 726 IPR017441 GO:0005524
Phacun635g00004 982 SMART LRR_typ_2 106 130 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 518 541 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 542 566 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 227 251 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 203 226 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 323 347 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 398 422 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 299 322 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 348 371 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 131 154 IPR003591 -
Phacun635g00004 982 SMART LRR_typ_2 446 470 IPR003591 -
Phacun635g00004 982 SUPERFAMILY L domain-like 57 385 - -
Phacun635g00004 982 ProSiteProfiles Protein kinase domain profile. 697 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun635g00004 982 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 774 977 - -
Phacun635g00004 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 40 968 - -
Phacun635g00004 982 SUPERFAMILY Protein kinase-like (PK-like) 699 972 IPR011009 -
Phacun635g00004 982 Gene3D Ribonuclease Inhibitor 318 594 IPR032675 -
Phacun635g00004 982 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 319 592 - -
Phacun635g00004 982 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 691 773 - -
Phacun635g00004 982 PRINTS Leucine-rich repeat signature 133 146 - -
Phacun635g00004 982 PRINTS Leucine-rich repeat signature 446 459 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun635g00004 32 981 Receptor kinase-like Gene Family AT3G56370 60.314 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Phacun635g00004 Pkinase 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun635g00004 - - gmx:100791204 1711.04