Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun42g00171 ATGTCCGGCTGTGACAGCGACAGCAGCAGCGACAGCGGAGAGCGGGGGCGGCGAAGGGAGACGCTGGACTTCCAGAACCTGAAGGTGGTGTCGGCGGTGGGACGCGGCGCGAAGGGCGTGGTGTTCCTGGCGCGGGTGGAGGGTGAAGGGAGCGGGGAGTGGATAGCGCTGAAGGTGGTGTCGAGGGAGCTGCTGAAGATGAAGAACAGGAACGAGGGAAGGTGCAAGAGGGTGTCGTTCGAGAGGCACATACTCCGTCGTCTGCATCACCCGCTATTGCCCAGATTCCGAGGCGCTTTCGACACCGACCAACTCACCGGTTTCGCAATCGATTATTGCCACGGCGGAAACCTCCATTCTCTCCGCATGAAGCAATCGGAGAAGTGCTTCTCCGAAGAAACCGTAAGGTTTTATGCAGTAGAATTGGTTCTAGTATTGGAGTATTTGCACAAGTTTGGAGTAGTGTATAGGGATTTAAAGCCAGAGAATATCATGATCCAAGAATCAGGTCACATAATGTTAGTGGATTTTGATCTTTCCAAGAAGTTAAATATTAGGTCAACCGAGTCGAGTTGCAACTCATCACCGGGTTCTGGTTCTGAGTCGTCGAGGGAGAAGGATCGGAGGAAGCGGCGATTATCACGATTCAACTGTTACTGTCATTCAGGGATATCCTTGTACGAGTCAGATATATCGAACCAACTCACCACCATCCCAACGCGTCGAAGCATGTCGGACTCGGTGGAGAAGTCCAACTCCTTTGTGGGAACGGAAGATTACGTGGCACCGGAGGTCATCTCCGGAGAAGGACACGACTTCGCCGTTGATTGGTGGTCATTAGGCGTTGTTATGTACGAGATGATTTACGGAGCGACGCCGTTTAAGGGTGCCAATAGGAAAGAAACGTTTCATCGTATCATAACCAAGGAGGTCGATCTATCAGGTGCAACGACGCCTTTGAGGGACTTGATTCAAAGCTTGCTTCACAAGGATCCTAGCCGTAGGATCCAGGTAAATGAGATCAAGAACCACCATTTCTTTAAAGGCGTCATGTGGGACACAATCTTGGAAATTTCACGTCCACCGCATATTCCTCAAAATGAGATCAAGGATTCGGTAGGGTTTTCTCAAAAGGAAGTAGAATCATTTGTTCATGGAATCTTTTTCCCCAAGAGTAAAGAGGAACCAAAAAACAATGAAAACCAAACCCCAAAGGAGGAAACTAATAAAAATGCCTGGGTTGACAAGTTAAATCAAAATTCTGCCAAAGATGAAAACTTTTTAATTTTTTGA 1293 0.4857 MSGCDSDSSSDSGERGRRRETLDFQNLKVVSAVGRGAKGVVFLARVEGEGSGEWIALKVVSRELLKMKNRNEGRCKRVSFERHILRRLHHPLLPRFRGAFDTDQLTGFAIDYCHGGNLHSLRMKQSEKCFSEETVRFYAVELVLVLEYLHKFGVVYRDLKPENIMIQESGHIMLVDFDLSKKLNIRSTESSCNSSPGSGSESSREKDRRKRRLSRFNCYCHSGISLYESDISNQLTTIPTRRSMSDSVEKSNSFVGTEDYVAPEVISGEGHDFAVDWWSLGVVMYEMIYGATPFKGANRKETFHRIITKEVDLSGATTPLRDLIQSLLHKDPSRRIQVNEIKNHHFFKGVMWDTILEISRPPHIPQNEIKDSVGFSQKEVESFVHGIFFPKSKEEPKNNENQTPKEETNKNAWVDKLNQNSAKDENFLIF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun42g00171 430 PANTHER FLIPPASE KINASE 1-RELATED 16 371 - -
Phacun42g00171 430 SMART serkin_6 27 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun42g00171 430 MobiDBLite consensus disorder prediction 187 209 - -
Phacun42g00171 430 FunFam Serine/threonine-protein kinase OXI1 249 366 - -
Phacun42g00171 430 Pfam Protein kinase domain 29 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun42g00171 430 Pfam Protein kinase domain 249 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun42g00171 430 MobiDBLite consensus disorder prediction 391 417 - -
Phacun42g00171 430 MobiDBLite consensus disorder prediction 391 412 - -
Phacun42g00171 430 ProSiteProfiles Protein kinase domain profile. 27 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun42g00171 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Phacun42g00171 430 Gene3D Transferase(Phosphotransferase) domain 1 248 366 - -
Phacun42g00171 430 Gene3D Transferase(Phosphotransferase) domain 1 117 192 - -
Phacun42g00171 430 SUPERFAMILY Protein kinase-like (PK-like) 25 377 IPR011009 -
Phacun42g00171 430 FunFam Serine/threonine-protein kinase OXI1 117 185 - -
Phacun42g00171 430 Gene3D Phosphorylase Kinase; domain 1 27 116 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun42g00171 17 430 AGC Kinase Gene Family AT3G25250 51.288 1.61e-141 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phacun42g00171 Pkinase 3.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun42g00171 K20714 - gmx:100813693 581.252