Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun42g00136 ATGGAATCCACTCTGGTGGCCAATAAGAAGACTCCACGTGTCAATGGGAAACACGTCACATCATCCCTTCATGCGTCCCTGTCCCACCTATCGAAAAAGTCCTTACCTTTTCGCTCACTTTTTCTTGCCTTCCCAAGAGTGAGAAACCCAAACTCCAACAGAGAAAGAGAGAGCGTTAGTGTGTGTCTGTGTTTTGGTGTGTGCATTCATTCAGCGATGTGCAACAAGAGCAGTCCTTCTTCTCCAGACATTCAAACAACCTCTATCATGAAGAGGACACGGAGACCAACCAAACGTTATCACTCTTCTTCCTCCTCCTCCTCCTCTTCTTCGTCGCTTAAGCCGCACCGGCGCGGAAACCGGACCAAGACGAGGAGGCCCAAGTTCGTTAGCCTGCGTCTTCAGCTATCCGAGCCCAACAACATAGCTGCTCAGCCCAAGCCCAAGCCCAAGGCCCTACAGCAGCCGCAGCTGAACCTCTTCCCTCTGCATCCGGAGCACCATGACATGCACGAGGAGCAGAACGTGGCGCTGCTCTTCAGCGCGGAGGGCGGGGCAACGCTGACAGGGCTTCTGGAGGAGGATTCGATGTCGCCGTCGTCGGCGACTACAGAGGGGTCGCTGTCGGCGCTGACTTGTCCGACGGAGGACGCGGGGAATTGGCTAGTGAGGAAGGCGATGCGGCGTAGGGAGAGCGAGGAGGGGAGCCAGGAAAGGTGGGTGTGCTATTCGGAGGTGGTGGAGGAGAAGAAGGAGGCGATGGAGGAGGTGACGAGTTATTGCATGATGGGGACAACGACGACCACAACGTCCTTTGGGTTGTTGTCTTTGAAGCTGGATCACCAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCGCTATACGTCGCGGGGGAGGGAGGCCCACACACTGTCCCAGACTTCCTCAATGGTTTCCTCCTTCATAATGCCTTCCTCCACCATGTTGCATGGGATGGCTGGGGGAATGGTGTGGTTGGGAACGCATGGGGTGTTCCTGAGGATTGTGGGGCAAACAAGACGAATGTGAAGGAGGAAAATGGTTGGAAGTTGGGGCAGAGAGAAGCAAGTGTGCAGAGATACAAGGAGAAGAGGCAAAGCAGGCTATTCTCTAAAAAGATCCGTTATGAAGTTCGCAAGCTGAATGCTGAGAAACGGCCCAGGATGAAGGGTCGATTTGTGAAGCGGGAATGA 1212 0.5429 MESTLVANKKTPRVNGKHVTSSLHASLSHLSKKSLPFRSLFLAFPRVRNPNSNRERESVSVCLCFGVCIHSAMCNKSSPSSPDIQTTSIMKRTRRPTKRYHSSSSSSSSSSSLKPHRRGNRTKTRRPKFVSLRLQLSEPNNIAAQPKPKPKALQQPQLNLFPLHPEHHDMHEEQNVALLFSAEGGATLTGLLEEDSMSPSSATTEGSLSALTCPTEDAGNWLVRKAMRRRESEEGSQERWVCYSEVVEEKKEAMEEVTSYCMMGTTTTTTSFGLLSLKLDHQGILNAWSDKGSLYVAGEGGPHTVPDFLNGFLLHNAFLHHVAWDGWGNGVVGNAWGVPEDCGANKTNVKEENGWKLGQREASVQRYKEKRQSRLFSKKIRYEVRKLNAEKRPRMKGRFVKRE* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun42g00136 403 ProSiteProfiles CCT domain profile. 360 402 IPR010402 GO:0005515
Phacun42g00136 403 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 88 403 - -
Phacun42g00136 403 MobiDBLite consensus disorder prediction 76 91 - -
Phacun42g00136 403 MobiDBLite consensus disorder prediction 76 150 - -
Phacun42g00136 403 MobiDBLite consensus disorder prediction 100 115 - -
Phacun42g00136 403 Pfam CCT motif 360 402 IPR010402 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun42g00136 275 402 C2C2-CO-like Transcription Factor Family AT1G73870 44.531 1.08e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phacun42g00136 CCT 1.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun42g00136 - - gmx:100798231 472.241