Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun42g00115 ATGCTCTTCATATTTCCACCCCTTCTGTCCATGAAGCTCCAACCTTTATGGCTGCCTCTTCTAATGTACTTTTGTGCATTTGCAGTGGCCTCTTCTCATAATCATGATGCTGTTGCTTCTTCTGAAGCAAATGCTTTGTTGAAGTGGAAAGCCAGCCTTGACAACCACAGTCAAGCTTTTCTCTCTTCATGGAATGGCAATAATCCTTGCAACTGGCTGGGAATTGCATGTGATGATTCCAATTCTGTTTCTGACATAAATCTTATACGTCTTGGATTAAAAGGTACACTTCAAACTTTTAACTTCTCATTACTTCCAAACATTCTCACTCTCAATATCAGTTACAACTCCTTGTCTGGAAGCATTCCTCCACAAATTCAACACTTGTCCAATCTCAGTACACTTGATTTGTCTACCAATAAACTCTCTGGTGCCATTCCCAATGCCATCTGTAATCTCTCCAAACTCAAATATCTCAATCTTAGTGTCAATGCTCTTTCTGGTCCTATTCCTAATGAAGTTGGCAATCTCCACTCTCTTCTCACATTCGATATATTTACCAACAACCTCTCTGGACCAATCCCTCCTTCCTTAGGTACCTTGCCCCTTTTGGAATCCATTCACCTTTTTCAAAATAAGCTCAATGGATCCATTCCTTCAACTCTTGGAAATTTGACCAAGCTCACTTTGTTATCTTTATCATCAAATCAACTCACCGGATCCATTCCTCCCCATATTGGAAATTTAACAAACGCCAAGGTTATATGTTTTATTGGAAATGAACTTACTGGCGAGATTCCAATAGAAATGGAAAAGCTTACTGGTCTGGAATGTTTGCAACTAGCTGATAACAATTTTATAGGCCAAATACCTCAGAACATTTGCCTCGGTGGAAACATGAAATACTTCACTGCTGGTAATAACAATTTCACTGGCCCAATTCCAGAGACTTTGAGGAAATGCTACAGCCTTAAAAGACTCAGGCTTCAGCAAAACCATCTAACTGGGGATATAACAAACTTTTTTGATGTACTTCCAAACTTGAACTACATTGATCTGAGTGAAAATAATTTTCATGGTAATCTTTCACCTAGTTGGGGAAAATTCCGTAGCCTCACAAGCCTCATGATCTCCAACAATAATTTGTCAGGTGTTATTCCACCAGAACTAGGTGGGGCAACCAAATTACAGATCCTTGATCTATCCTCAAACCATCTTTCAGGAAACATTCCAGAAGATTTATGCAGCTTGACCCTCTTGTTTGATCTTTCAATTAGCAACAATAATCTTTCCGGAAATGTTCCCATGAAAATAGAATCACTGCAGGAACTTCAAATTTTGGAGCTTGGATCAAATGATTTCAGAGGCTTAATCCAAAAACAACTCGGAAATTTGCACAATTTACGCAACATGAGTCTGAGCCAGAATAAATTTGAGGGAAATATTCCTCCAGAGCTTGGCAATTTGAAATATCTCTCAAGTCTGGATCTCAGTGGAAATTTGTTGAGTGGAACATTACCACCGACGCTTGGTGGAATAAAGGGCTTAGAAGCATTGAATCTATCGCACAATAGCCTTTCAGGTGATCTCTCAAGCTTAGATAATATGATAAGCTTGACATCTTTTGATATATCATACAACCAGTTTGAGGGTCCACTTCCTAACAATCCAGTCTTCGAGAATGCTACAATTGCATCCTTGAGAGATAATAAAGGACTGTGTGGGAATGTCACAGGCTTGGTCCCTTGCCCAACAGGAAGTGTGAAATCTCATAATAATACGGCAAGGACAGTGCTAATAGCAGTTTTACCCCTTACTGTGGCCATTCTAATGCTTGGACTATTTGTTTTTGGGGTCTCTTATCATTTTTGCCGAACTTCAAACAAAGAACAAGACCAGGCTACAAGTTTACGATCTCCTAGCATATTCCCAATATGGAGTTTTGGTGGCAAAATTATGTTTGAGAATATTATTGAAGGCACAGAAAATTTTGACGACAAACATCTGATTGGAGTTGGAGGGCAAGGATGTGTTTACAAAGCAATACTACCTACAGGTGAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTTCAAATGAAGAAATGCTCAACATGAAAGCTTTCACAAGGGAGATCCAAACTTTGACAGAAATTCGACATCGAAACATTGTAAAGCTATATGGGTTTTGTCCACATTCACAATATTCATTTTTGGTGTGTGAATTTCTAGAGAAGGGCGATGTGAAAAAGATTTTGAAGGATGACGAACAAGCAATTGCATTTGATTGGAAGAAAAGGGTGGATGTTATTAAAGGTGTAGCAGATGCTTTGTGCTATATGCACCATGATTGCTCACCTCCAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATTCGGAATATGTAGCTCATGTCTCAGACTTCGGTACAGCTAAGTTTCTAAATCATAATTCATCAAATTGGACCTCATTTGCAGGAACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAGGCAAATGAGAAATGTGATGTGTATAGTTTTGGGGTGTTAGCATTGGAAATATTGTTTGGAAGGCATCCTGGTGATATTACATCTTCCTACATTGGTGTGAGCTCAACACTTGATGATATGGTATTGATGGATATGTTGGACGAACGTCTCCCTCATCCAACAAGCCATGTAATTAAGGATGTGGTATCAATTGTGAAGACAGCAATTTCCTGCTTGATTGAAAGCCCACGATCTCGCCCTACCATGGACCAAGTTGTCAAGGAGCTTCTAACGTCATCAAACTCATCTTTTTTACAACATACGAACCTAGAGCAAAAAGACTGA 2853 0.3919 MLFIFPPLLSMKLQPLWLPLLMYFCAFAVASSHNHDAVASSEANALLKWKASLDNHSQAFLSSWNGNNPCNWLGIACDDSNSVSDINLIRLGLKGTLQTFNFSLLPNILTLNISYNSLSGSIPPQIQHLSNLSTLDLSTNKLSGAIPNAICNLSKLKYLNLSVNALSGPIPNEVGNLHSLLTFDIFTNNLSGPIPPSLGTLPLLESIHLFQNKLNGSIPSTLGNLTKLTLLSLSSNQLTGSIPPHIGNLTNAKVICFIGNELTGEIPIEMEKLTGLECLQLADNNFIGQIPQNICLGGNMKYFTAGNNNFTGPIPETLRKCYSLKRLRLQQNHLTGDITNFFDVLPNLNYIDLSENNFHGNLSPSWGKFRSLTSLMISNNNLSGVIPPELGGATKLQILDLSSNHLSGNIPEDLCSLTLLFDLSISNNNLSGNVPMKIESLQELQILELGSNDFRGLIQKQLGNLHNLRNMSLSQNKFEGNIPPELGNLKYLSSLDLSGNLLSGTLPPTLGGIKGLEALNLSHNSLSGDLSSLDNMISLTSFDISYNQFEGPLPNNPVFENATIASLRDNKGLCGNVTGLVPCPTGSVKSHNNTARTVLIAVLPLTVAILMLGLFVFGVSYHFCRTSNKEQDQATSLRSPSIFPIWSFGGKIMFENIIEGTENFDDKHLIGVGGQGCVYKAILPTGEVVAVKKLHSVSNEEMLNMKAFTREIQTLTEIRHRNIVKLYGFCPHSQYSFLVCEFLEKGDVKKILKDDEQAIAFDWKKRVDVIKGVADALCYMHHDCSPPIVHRDISSKNVLLDSEYVAHVSDFGTAKFLNHNSSNWTSFAGTFGYAAPELAYTMEANEKCDVYSFGVLALEILFGRHPGDITSSYIGVSSTLDDMVLMDMLDERLPHPTSHVIKDVVSIVKTAISCLIESPRSRPTMDQVVKELLTSSNSSFLQHTNLEQKD* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun42g00115 950 ProSiteProfiles Protein kinase domain profile. 664 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun42g00115 950 Pfam Protein kinase domain 665 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun42g00115 950 Gene3D Ribonuclease Inhibitor 190 296 IPR032675 -
Phacun42g00115 950 FunFam Leucine-rich repeat receptor protein kinase MSP1 626 742 - -
Phacun42g00115 950 SUPERFAMILY Protein kinase-like (PK-like) 641 932 IPR011009 -
Phacun42g00115 950 FunFam Uncharacterized protein 295 592 - -
Phacun42g00115 950 Gene3D Ribonuclease Inhibitor 297 591 IPR032675 -
Phacun42g00115 950 ProSiteProfiles Leucine-rich repeat profile. 395 418 IPR001611 GO:0005515
Phacun42g00115 950 FunFam MDIS1-interacting receptor like kinase 2 743 938 - -
Phacun42g00115 950 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Phacun42g00115 950 Gene3D Phosphorylase Kinase; domain 1 624 742 - -
Phacun42g00115 950 SMART LRR_typ_2 369 393 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 465 489 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 129 152 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 273 297 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 105 128 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 441 464 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 153 177 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 394 417 IPR003591 -
Phacun42g00115 950 SMART LRR_typ_2 225 249 IPR003591 -
Phacun42g00115 950 ProSitePatterns Tyrosine protein kinases specific active-site signature. 788 800 IPR008266 GO:0004672|GO:0006468
Phacun42g00115 950 PRINTS Leucine-rich repeat signature 132 145 - -
Phacun42g00115 950 PRINTS Leucine-rich repeat signature 513 526 - -
Phacun42g00115 950 PANTHER LEUCINE RICH REPEAT KINASE 2 204 936 - -
Phacun42g00115 950 FunFam Nuclear pore complex protein NUP107 39 194 - -
Phacun42g00115 950 FunFam MDIS1-interacting receptor like kinase 2 isoform A 195 294 - -
Phacun42g00115 950 SMART LRR_sd22_2 129 155 - -
Phacun42g00115 950 SMART LRR_sd22_2 393 412 - -
Phacun42g00115 950 SMART LRR_sd22_2 489 518 - -
Phacun42g00115 950 SMART LRR_sd22_2 441 467 - -
Phacun42g00115 950 SMART LRR_sd22_2 225 251 - -
Phacun42g00115 950 Pfam Leucine rich repeat 370 430 IPR001611 GO:0005515
Phacun42g00115 950 Gene3D Ribonuclease Inhibitor 38 189 IPR032675 -
Phacun42g00115 950 ProSiteProfiles Leucine-rich repeat profile. 515 537 IPR001611 GO:0005515
Phacun42g00115 950 SUPERFAMILY L domain-like 296 566 - -
Phacun42g00115 950 Gene3D Transferase(Phosphotransferase) domain 1 743 949 - -
Phacun42g00115 950 SUPERFAMILY L domain-like 69 387 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun42g00115 102 836 Receptor kinase-like Gene Family AT4G08850 44.624 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phacun42g00115 Pkinase 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun42g00115 - - gmx:100809509 1424.84