Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun42g00102 ATGGTCGTGGGTTCCTTCATACTAACTTCTAATACCAAGAGAAGGGCCATCTACAAATTTTCCACCGACATGGACACTGAAGCTGCCACCAAGATCAAGCTTGATGCATTGAAAGAAAGAGTTGGGCGAGAGATCCGTGTTTTTGAAACATTTGTTTCTTCATCATCAAATGCAGCATTATCCAATGAAGAGTTGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATCACAGAATTTTGGCAGCTAAAAAGGAAGATAATTTCTTGAAGACTCGAAAAATCCGAGAAGCCGAAGAGGCAGCGCGTAGGTCAGAAATGACGAAGGCTATAATTAGAGTTCGATTCCCAGATAATCACACATTGGAGACTACCTTCCACCCATCAGAAACAGTCCAGAGTTTAATTGATGTCCTGACTAAAGTTATTGCACTGCCAGAGCAGCCATTCTATATATATACTACTCCGCCTAAAAAGATCATGAAAGACATGTCTCAGAATTTTTATGATGCTGGCTTTTGTCCTGGAGCCATTGTCTACTTCTCGTACCATGTCCCAAAAGGTAGCACTGGTCCTTACCTTGAAGAAGATATATTATCTTTGAAGGAACTGCATGCTGCTAATGGTCAAGGCCAACAATCTGAGCCTTTAGTACAGTCAGAACCGGAACCTGCAGTGGCAACACATCCTCCTGTTGAACAACGCAAACCTGCTGAGAAAAAGCTTGTTAAACCAAAGTGGTTAAAAATGTGA 753 0.4143 MVVGSFILTSNTKRRAIYKFSTDMDTEAATKIKLDALKERVGREIRVFETFVSSSSNAALSNEELTDDFYEFTAEDYHRILAAKKEDNFLKTRKIREAEEAARRSEMTKAIIRVRFPDNHTLETTFHPSETVQSLIDVLTKVIALPEQPFYIYTTPPKKIMKDMSQNFYDAGFCPGAIVYFSYHVPKGSTGPYLEEDILSLKELHAANGQGQQSEPLVQSEPEPAVATHPPVEQRKPAEKKLVKPKWLKM* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun42g00102 250 MobiDBLite consensus disorder prediction 208 250 - -
Phacun42g00102 250 Gene3D - 99 182 - -
Phacun42g00102 250 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Phacun42g00102 250 Pfam UBX domain 108 177 IPR001012 GO:0005515
Phacun42g00102 250 MobiDBLite consensus disorder prediction 233 250 - -
Phacun42g00102 250 CDD UBX2_UBXN9 110 183 - -
Phacun42g00102 250 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 9 250 IPR044232 GO:0032984|GO:0051117
Phacun42g00102 250 SUPERFAMILY Ubiquitin-like 84 181 IPR029071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun42g00102 39 138 C2H2 Transcription Factor Family AT2G01650 36.538 8.86e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun42g00102 K15627 - gmx:100818386 358.992