Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun42g00078 ATGGGAAGAAGCTCTCCAATGTCAGTCATTACCTGCTTCTTTGTCCTGCAATGGTTAACATGGTCAAGGGTGCTTGTGGCTCATGGAAGAAGTCATTGCTCAAGGTCCATTATGAGCATAGGTGCTGTGCTTGATTTGAGTTCACAAATTGGAAAACATCAGAAGATAGCCATGGAAATTGCAGTCCAAGACTTCAATCGGTTGAGTTGTTCTAAGCTGGTTTTGAAGATAAAAAATTCCAATGGGAATTCAGCTCAAGCAGTTGCTAGTGCTATGCATCTGGCCCAAAGCAAGCAAGTGCTAGCCATCATAGGTACAATAACACACAATGAAGCAACTCTCGCAAGTGAACTTAATGACAAAATAAAAAATATTCCTGTCTTGTCTCTAATTTCACCTGTAGCAAGATCAGAGCAAGTATCACCTCTATTGCCGTACTTTATCCAAGTGGGATATAGTATCAACCTTCACATGCAATGCATTGCAGCCATTGTAGGAGAATATAGATGGAGAAAGGTGACAGCAATCTATGAATTTGATGACAGATTTTCTTCTGATCCAGGGATGCTACTCAACCTCTCCTATTCTCTAAGACTTGTTGGTTCTGAGATTGACAATCATGTAGCTTTTCCTTCCTTGTCCTCTCTATTAGACCCAAATTCTACCATTGAAAATGAGTTTAATAGGCTAAAAAGCAAGAGTAACAGGGTCTTCTTGATTCTACAATCTTCTATAGAGCTAGCTAACCTACTTTTTGAGAAAGCAAACCAAATGGGTTTAATGGGAAAGGGTTCTGTGTGGATCATCCCAGATGGGATTGCTGGTAATCTTGATTCAGTAAACCCGTCTGCTATCCTTAACATGCAAGGAGTTATTGGATTTAAGACACACTTCTTGGAAACAAGCAAGGAATTTAGAAGGTTTAAATTCAAATTTCGTAGAAGGTTTGTGTTGGAGTTCCCGGAAGAAGAGAACATTAACCCAAGTTCCTTTGCACTTCAATCGTATAAAGCAACCTGGGAAGTTGCTCAAGCTGCAAGAGAATCACAAGGGAAGTTAACCCTTAAACAATTATTAAAAAGTAATATCTCCAGGACTGAGAAATTACGGAAATCACCGACCCTCAAAATAATTAACGTGATAGGTAAAAGTTACAGAGAGTTGGCATCATGGTCTCCAGCATTAGGTTTCTCCAAAAGCCTTGTTACAGAACAGCCGACAGAGATGAACGCAAACAGTGGTTCAAGTGGAGTTTTGAGTAAAGTTTATTGGCCTGGAGGTATACAATTTGTTCCTAAGGGATGGACTCACAGCACCAAAGGGAGGAAACTGAAAATAGGAGTGCCTGCAGAAGGTGCATTTGCTGATTTCGTGAATGTGAAATATGATATCATCAGGAATATAACTTCTATTACTGGATTCTCAATTGATGTCTTTAAAGCAGCTGTTCATAATTTGGCTTATGATTTGAATTTCGATTTTGTTCCCTTCAATGGATCTTATGATGAAATGGTAGATCAAGTCTACAATAAGACATTGGATGCTGCTGTCGGAGATACATCAATAATGGCATATAGATATCATTTAGTTGACTTCTCACAACCGTATGTTGAATCTGGTATTGACATGGTGGTCACAGAGCAGCCAGCTAAATTGAAGGAAACATGGATTTTTTTAGAAGCCTTCACAAAAGACATGTGGATAATGATGGCAGCACTGCACATTTTTGTGGGATTCGTCATATGGTTGATCGAAAGGCAAGTTAATGCAGAACTAAAAGGATTGGGGTCCATGCTTTGGTTCTTAGTCACTGTAATATTCTATGCACACAGTAAGTCCTCTAACTAG 1848 0.3929 MGRSSPMSVITCFFVLQWLTWSRVLVAHGRSHCSRSIMSIGAVLDLSSQIGKHQKIAMEIAVQDFNRLSCSKLVLKIKNSNGNSAQAVASAMHLAQSKQVLAIIGTITHNEATLASELNDKIKNIPVLSLISPVARSEQVSPLLPYFIQVGYSINLHMQCIAAIVGEYRWRKVTAIYEFDDRFSSDPGMLLNLSYSLRLVGSEIDNHVAFPSLSSLLDPNSTIENEFNRLKSKSNRVFLILQSSIELANLLFEKANQMGLMGKGSVWIIPDGIAGNLDSVNPSAILNMQGVIGFKTHFLETSKEFRRFKFKFRRRFVLEFPEEENINPSSFALQSYKATWEVAQAARESQGKLTLKQLLKSNISRTEKLRKSPTLKIINVIGKSYRELASWSPALGFSKSLVTEQPTEMNANSGSSGVLSKVYWPGGIQFVPKGWTHSTKGRKLKIGVPAEGAFADFVNVKYDIIRNITSITGFSIDVFKAAVHNLAYDLNFDFVPFNGSYDEMVDQVYNKTLDAAVGDTSIMAYRYHLVDFSQPYVESGIDMVVTEQPAKLKETWIFLEAFTKDMWIMMAALHIFVGFVIWLIERQVNAELKGLGSMLWFLVTVIFYAHSKSSN* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun42g00078 615 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 604 IPR015683 -
Phacun42g00078 615 Gene3D - 153 329 - -
Phacun42g00078 615 SMART GluR_14 443 615 IPR001320 GO:0015276|GO:0016020
Phacun42g00078 615 Gene3D - 436 563 - -
Phacun42g00078 615 FunFam Glutamate receptor 157 326 - -
Phacun42g00078 615 Pfam Receptor family ligand binding region 55 359 IPR001828 -
Phacun42g00078 615 SUPERFAMILY Periplasmic binding protein-like I 34 435 IPR028082 -
Phacun42g00078 615 FunFam Glutamate receptor 439 554 - -
Phacun42g00078 615 SUPERFAMILY Periplasmic binding protein-like II 421 572 - -
Phacun42g00078 615 Pfam Bacterial extracellular solute-binding proteins, family 3 470 551 IPR001638 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun42g00078 16 613 Ion Channels AT2G29100 30.335 9.01e-84 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun42g00078 - - gmx:100778941 987.638