Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun42g00038 ATGAAGGCCGTGCCCCTACCCTTTCAGGAATTTAGAGGGAACGGGGTGTTAGATTTTGCTTCTGGTGCTGTTGCTGTTTCAGATTCGCTGTTACTCCCACAGCAAGAGCAATTTCTGCAAAGGTGGAATCCCCACAGGGAAAACTATTGCTATGTGGGCATTGACCCCACTTCTGGTTTGGACCTCAAAAGGAAAACAAGCCCTCCCACATCCTCCTCTACACTGTCTTCCTCACGCGCCAGCAGCGGCTGCGGTGGAGGCTGCGGCTCGACCGATAGCACCACCGGCGCTGGGGCAGCGAAGGTCTCGACTGAGAAGGAGAACAACCCACCTCAAGCAGGGTTAGAGGTTGGGCAGGGAAGATGTGGGCTGGGAATGGAGGATTGGGAGAGTGTGTTGTCTGAGTCATCAGGTCAAGATAATTCCATTTTGAAATTGATTATGGGAGACATTGAGGACCCTTCTGTGGGATTGACCAAGCTTTTGCAGGGTGGAAGCGCCTCTCAGGATGTTGAGTTCAATGGGGTTGGAGTGGGTTTTAGTTTGGTGGATCAAAGTTCTGTTCTCGATCCCATTCCCAGTGTCAACTTTATGACCAGCATTGACCCTTCTGGTCCTGGGAATTCTTCCGACTTCCCTTTCAATTCCCACAGTAACGTTGGCTCCAATATTTCCAGAGTTGGTTCTGCTGTGAATCCGCCAAACCCTGGCTTCCCTGATTCAGCTAGAAATCTCTCACCAGTTTCACTCCCTCAGGGTGTTTTTCACCCACATCAACAACACCATCCACCAATAGAGCCTCTGGATGAGAAGCTGCAAGTTCTCAATCCCCAGTTTATTTTGAACCAAAATCAAACTCAATTTATGGCAAACCCAGGTTCGGTTTTGCCTTTGACTTATGCTCAGTTGCAAGAACATCATCAGCTTCTCCCACAGCCTCCGGCCAAACGCCTCAATTGTGGCCCAAATTATCAGGTTCCTAAGGCACCCTTTTTGGACTCTGGCCAAGAGCTGTTACTACGGAGGCAGCAACAGCAGCTTCAACTGCTCCCTCACCATCTGCTTCAGAGGCCATCCATGGTGGTGGCCCCAAAGCATAAAATGGCGAGCCCCAGCGGTGAAGATTTGGCAACCCACCAGCTTCAACAGGCTATAACTGAACAGCTTTTCAAGACTGCAGAGCTGATCGATGCCGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCCCCCTTTGGGAAGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTAGGACTTCATTCAAATGCCAACAACAGTTCTATGACCTTCTCACCCACTGGCCTTCTGCTCAAAATTGGTGCCTACAAATCATTCTCAGAAATCTCCCCGGTTCTGCAGTTCGCCAATTTCACTTGTAATCAAGCACTGCTTGAAGCTGTGGAAGGGTTTGATCGCATTCACATAATAGATTTTGATATTGGGTTTGGTGGGCAGTGGTCTTCTTTCATGCAAGAGTTAGCACTGAGAAATGGAGGTGCACCTGAACTCAGGATCACAGCATTTGTGTCACCCTCCCACCATGATAAAATTGAGCTCAGTTTCACTCAGGAGAATTTGAAGCAATATGCTGGCGAGATAAACATGTCCTTTGAGCTTGAGATTTTGAGCTTTGAATCTTTAAATTCGGCTTCCTGGCCCCAGCCACTTCGTGATTGTGAAGCTGTAGTGGTTAACATGCCTATTGGCTCATTCTCAAGCTACCCATCATATCTTCCTTTGGCCCTTCGCTTTGTGAAGCAGCTCATGCCAAAACTTGTGGTTACATTGGATAGAAGTTGTGATCGAACTGATGCACCATTTCCTCAGCATCTGATTTTTGCACTTCAATCTTATTCAGGGCTGCTTGAATCACTTGATGCCGTTAATGTTCACCCAGATGTCCTTCAGATGATTGAGAAGTATTATCTTCAACCAGCAATGGAGAAGCTTGTTTTGGGCCGACATGGTTTTCAGGAAAGAATACTTTCTTGGAAAAACCTTCTCTTGTCATCTGGGTTTTCACCATTGGCCTTTAGTAACTTTACAGAATCTCAAGCAGAGTGTTTGGTGCAGAGGACTCCGGGTAAGGGATTCCATGTTGAGAAAAGACAATCTTCCCTGGTTCTTTGCTGGCAAAGGAAGGATCTCATCTCAGTTTCAACCTGGAGATGCTGA 2229 0.476 MKAVPLPFQEFRGNGVLDFASGAVAVSDSLLLPQQEQFLQRWNPHRENYCYVGIDPTSGLDLKRKTSPPTSSSTLSSSRASSGCGGGCGSTDSTTGAGAAKVSTEKENNPPQAGLEVGQGRCGLGMEDWESVLSESSGQDNSILKLIMGDIEDPSVGLTKLLQGGSASQDVEFNGVGVGFSLVDQSSVLDPIPSVNFMTSIDPSGPGNSSDFPFNSHSNVGSNISRVGSAVNPPNPGFPDSARNLSPVSLPQGVFHPHQQHHPPIEPLDEKLQVLNPQFILNQNQTQFMANPGSVLPLTYAQLQEHHQLLPQPPAKRLNCGPNYQVPKAPFLDSGQELLLRRQQQQLQLLPHHLLQRPSMVVAPKHKMASPSGEDLATHQLQQAITEQLFKTAELIDAGNLELAHGILARLNHQLSPFGKPFQRAAFYFKEALQLGLHSNANNSSMTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPELRITAFVSPSHHDKIELSFTQENLKQYAGEINMSFELEILSFESLNSASWPQPLRDCEAVVVNMPIGSFSSYPSYLPLALRFVKQLMPKLVVTLDRSCDRTDAPFPQHLIFALQSYSGLLESLDAVNVHPDVLQMIEKYYLQPAMEKLVLGRHGFQERILSWKNLLLSSGFSPLAFSNFTESQAECLVQRTPGKGFHVEKRQSSLVLCWQRKDLISVSTWRC* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun42g00038 742 ProSiteProfiles GRAS family profile. 376 741 IPR005202 -
Phacun42g00038 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 353 737 IPR005202 -
Phacun42g00038 742 MobiDBLite consensus disorder prediction 63 110 - -
Phacun42g00038 742 Pfam GRAS domain family 386 741 IPR005202 -
Phacun42g00038 742 MobiDBLite consensus disorder prediction 60 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun42g00038 353 742 GRAS Transcription Factor Family AT4G00150 55.980 9.41e-141 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phacun42g00038 GRAS 4.5e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun42g00038 - - gmx:100805945 1213.75