Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun402g00014 ATGAGTTGCTTTTGTTCTGGGACTCGGGGGAAGGATGTGGGCATTGAGAGTTTAGGGTCAAACTCAAAGACAAAGCCGAAGAAAGCGTCTGCAACGAGTTACAGTTTTCGCGAGCTTGCAACGGCGGCGAGGGGTTTTAAGGAAGAGAACTTGATTGGGGAAGGAGGTTTTGGAAAGGTGTACAAGGCTCGTCTCTCAACAGGCCAACTTGTTGCCATAAAACAGTTACGTCTAGATGGTGAAAGTCATCAGGGTAATAGGGAATTTGTGACGGAGGTTCTTATGTTGAGCCTCCTTCACCATTCTAATCTAGTTAAATTGTTTGGCTACTGCACCCATGGGGATCAGAGGCTTTTGGTTTATGAATACATGGCCATGGGAAGCCTGGAACAGTATCTCTCACAGAAAAACCCACTGGGTTGGAGAAATCGACTCAAGATTGGCGTGGGGGCTGCAAGGGGGCTCCAGTATCTACACTGTGTAGCGAATCCTCCTGTTATCTATCGGGACTTGAAATCAGCCAACATCTTGTTAGACAACAATTTGCACCCTAAACTCTCTGACTTTGGGCTGGCAAAGCTAGGACCTGTCGGAGACAATACCCATGTTTCCACCAGAGTCATGGGAACATATGGCTACTGTGCCCCCGAGTATGCCATGAGTGGAAAATTAACTCTTAAATCTGATATATACTGCTTTGGTGTCGTCTTGCTCGAGTTGATCACCGGACGCAAGGCAATGGATGTCACTAGGAAACAACGGGAGCAAAGCTTGGTTGCATGGGCTCGGCCATATTTGAGCGACCGGAGAAAGGTTTCGCAGATTGTTGACCCTCTTTTGGAAGGAAGGTACCCCCTACGTTGTTTGCAGAATGCAATTGCTATCACTGCAATGTGCCTCCAGGAGCAACCCAATCTTCGTCCTTCCATAACTGACATTGTTGTTGCATTGGAGTACCTCGCCTCTGAAAGCTCTGAAGTCGTCAGGCACCGTGCACGCACCCCACCACCACGCCAATCACACTCACAATCCGACACCCAATCCGACACAACAAACTAG 1059 0.4844 MSCFCSGTRGKDVGIESLGSNSKTKPKKASATSYSFRELATAARGFKEENLIGEGGFGKVYKARLSTGQLVAIKQLRLDGESHQGNREFVTEVLMLSLLHHSNLVKLFGYCTHGDQRLLVYEYMAMGSLEQYLSQKNPLGWRNRLKIGVGAARGLQYLHCVANPPVIYRDLKSANILLDNNLHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAMDVTRKQREQSLVAWARPYLSDRRKVSQIVDPLLEGRYPLRCLQNAIAITAMCLQEQPNLRPSITDIVVALEYLASESSEVVRHRARTPPPRQSHSQSDTQSDTTN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun402g00014 352 Gene3D Phosphorylase Kinase; domain 1 14 123 - -
Phacun402g00014 352 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
Phacun402g00014 352 Pfam Protein kinase domain 46 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun402g00014 352 PIRSF ILK 9 334 - -
Phacun402g00014 352 SMART serkin_6 46 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun402g00014 352 MobiDBLite consensus disorder prediction 337 352 - -
Phacun402g00014 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Phacun402g00014 352 MobiDBLite consensus disorder prediction 326 352 - -
Phacun402g00014 352 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Phacun402g00014 352 ProSiteProfiles Protein kinase domain profile. 46 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun402g00014 352 CDD STKc_IRAK 52 318 - -
Phacun402g00014 352 PANTHER OS07G0668900 PROTEIN 24 326 - -
Phacun402g00014 352 Gene3D Transferase(Phosphotransferase) domain 1 124 336 - -
Phacun402g00014 352 FunFam Serine/threonine-protein kinase PBS1 124 334 - -
Phacun402g00014 352 FunFam Serine/threonine-protein kinase CDL1-like 18 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun402g00014 30 346 Glycoside Hydrolase AT3G07070 58.025 9.03e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phacun402g00014 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun402g00014 - - gmx:100794722 540.421