Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun402g00003 ATGGAGGAGCAAATAGACCCAAGGAGTGGCTTCTGCCCCTCCAACTCAGTTTTCTACAGCAAGCGGAAGCCACTCCCACTCCCTCCCAACAACGCCCTCGACGTCACCACCTTCATCTCCTCCCGAGCCCACCGCGGGACCACCGCCTTCATCGACGCCGCCACAGGCCGTCACCTCAGCTACAGCCAGCTATGGCGAGCGGTGGAGGGCGTTGCAGGCTCTCTCTGGGACATGGGGATCCGAAAGGGCAACGTGGTCCTGCTCCTCTCTCCCAACTCCATCGACTTCCCGGTGGTGTGCCTGGCCATCATGTCCCTGGGCGCCGTCATCACCACCACCAACCCCCTCAACACCACGCAGGAAATTGCCAAGCAGATCGCCGATTCCAAGCCCCTCCTCGCCTTCACCACCCCTCTCTTGCTCCCCAAACTCACCAAGGCAGCACCCTCTCTGCCAATCATTCTCATGGACACCACCGCTCATTCACCTCTTCCCCACCCCAAAATCGTAGCCACGCTCCACGACATGGCCAAGAAGGAACCCCGGGCTGAGCGCGTGAGGGAGCGCGTGGAGCAGGACGACACGGCCACGCTGCTCTACTCCTCCGGCACCACGGGACCCAGCAAGGGCGTGCTTTCCTCCCACCGGAACCTCATAGCCATGGTCCAAATCGTTCTCGGTCGCTTCCACGTCGAAGACAACGAAACCTTCATCTGCACGGTCCCCATGTTTCACATATACGGTCTCGTCGCCTTCGCCACCGGCCTCCTCGCCTCCGGCTCCACCATCGTCGTCCTCTCCAAGTTCGAGATGCACGACATGCTCTCCTCCATACAGAGGTTCCGCGCCACCTACCTTCCCCTGGTTCCACCCATTCTAGTTGCCATGCTCAACAACGCAGACGCCATCAAGGGAAAGTACGATATCCGGTCCCTGCATTCGGTCCTCTCCGGTGGGGCTCCCTTGAGTAAGGAGGTTATAGAGGGGTTTGTCGACAAGTACCCCAACGTCACCATCCTTCAGGGTTATGGTTTGACGGAATCCACCGGCGTTGGGGCCTCCACCGACTCCTTGGAGGAGAGTCGCAGGTACGGCACTGCGGGCCTCTTGTCGCCGGCCACCCAAGCCATGATCGTCGACCCTGACTCCGGCCACTCGCTTCCGGTTAACAGCACCGGTGAGCTCTGGCTCAGGGGTCCCACCATTATGAAAGGTGAGGAATCATTCAAGTATTCAACTTTTCTTTTTCTTCTACTTTTTCTTTTCAAGCATTATTCATAG 1281 0.5894 MEEQIDPRSGFCPSNSVFYSKRKPLPLPPNNALDVTTFISSRAHRGTTAFIDAATGRHLSYSQLWRAVEGVAGSLWDMGIRKGNVVLLLSPNSIDFPVVCLAIMSLGAVITTTNPLNTTQEIAKQIADSKPLLAFTTPLLLPKLTKAAPSLPIILMDTTAHSPLPHPKIVATLHDMAKKEPRAERVRERVEQDDTATLLYSSGTTGPSKGVLSSHRNLIAMVQIVLGRFHVEDNETFICTVPMFHIYGLVAFATGLLASGSTIVVLSKFEMHDMLSSIQRFRATYLPLVPPILVAMLNNADAIKGKYDIRSLHSVLSGGAPLSKEVIEGFVDKYPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPATQAMIVDPDSGHSLPVNSTGELWLRGPTIMKGEESFKYSTFLFLLLFLFKHYS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun402g00003 426 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Phacun402g00003 426 Pfam AMP-binding enzyme 42 405 IPR000873 -
Phacun402g00003 426 Gene3D - 16 406 IPR042099 -
Phacun402g00003 426 SUPERFAMILY Acetyl-CoA synthetase-like 41 405 - -
Phacun402g00003 426 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun402g00003 5 405 Monolignol Biosynthesis Gene Families AT1G20510 69.652 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun402g00003 K10526 - gmx:100811344 661.759