Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun396g00001 ATGGGGAGAGGTGCGGTGAATGAGGGAGACGCGGTTTTTGCTGTCAAGAGTGTTCTTCAGAGGCCTATTAGTTTGATTCAAGGACCACCTGGAACTGGTAAGACTGTAACTTCTGCAGCACTTGTATATCACATGGCCAAGCAAGGCCAGGGGCAGGTTTTGGTTTGTGCACCCAGTAATGTAGCTGTTGACCAGCTAGCTGAAAAGATTAGTGCTACTGGATTAAAGTTTTACATCTGTTGGGGATTAATTGTACTGGGTAAACATGACATTTTGTTTCATCATATTTCAGGTGAACTTTCCAGTAGTGATGAGAAAAAATACAAAGCTCTTAAGCGAGCAACAGAGAGGGAGATTTCTCAGAGTGCAGATGTGATCTGCTGTACATGTGTTGGTGCTGGAGATCCTCGGCTTGCAAACTTTAGGTTCCGTCAGGTGCTTATTGATGAGTCTACTCAAGCAACTGAACCCGAGTGCCTCATACCTTTGGTCCTAGGAGCAAAGCAGGTTGTTCTTGTTGGCGATCATTGTCAGCTTGGTCCAGTTATTATGTGCAAGAAAGCAGCCCGTGCTGGATTAGCACAGTCACTTTTTGAATTCCTGTTATATGTATCATTATTTCTCACAATAAAAATGCCATTTGAGCCTTTCTGTTAA 657 0.4353 MGRGAVNEGDAVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKFYICWGLIVLGKHDILFHHISGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFEFLLYVSLFLTIKMPFEPFC* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun396g00001 218 CDD DEXXQc_UPF1 12 202 - -
Phacun396g00001 218 Gene3D - 10 206 IPR027417 -
Phacun396g00001 218 PANTHER DNA2/NAM7 HELICASE FAMILY 14 201 IPR045055 -
Phacun396g00001 218 Pfam AAA domain 14 72 IPR041677 GO:0004386
Phacun396g00001 218 Pfam AAA domain 103 184 IPR041677 GO:0004386
Phacun396g00001 218 Gene3D - 94 116 - -
Phacun396g00001 218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 203 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun396g00001 5 157 Core DNA Replication Machinery Family AT1G08840 27.564 6.39e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun396g00001 K14326 - pvy:116138325 311.997