Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00098 ATGGTTGATCAACAAATTATCGGTGTTGTTGCTTCATCCTCTTACTCTTCTTCAGTTGTATCATCTAAAGGATATGACGTGTTTCTAAGCTTTCGAGGTGAGGACACCCGCAAGAAATTCACAAGCCATCTTTATGATGCTTTGAAGCAAAAGGGAGTTGAAACCTTTATCGACTATCGTCTTGAAAAGGGAGAGGAGATCTCATCAACTCTCACCCAAGTAATTGAAGATTCCCATATATCTATTGTCATCTTCTCAGAGAACTATGCTTCCTCAAAGTGGTGCTTGGGTGAACTCAGCAAGATTATGGAATGTAAGAAAGAAAAAGGACAGATTGTGATACCAGTGTTCTATGACATAGATCCATCCCATGTAAGGAAGCAAACTGGAAGCTATGAGAAATGTTTTGTAACTCATAAGGGAGAACCCATGTGCAACAAATGGAAAGCTGCTCTCACTGAAGCAGCCAATTTGGCTGCATATGACTCTCAAACTTACAGGGTTGAATCTGAACTCCTTAAGGATATTGTTGAAGATGTTTTGCAAAAAATGGCTGCTATATACCCAAACTGCCACAAAGGATTGGTTGGAATTGAGGAAAAGTATGAAAAGATTGAGTCATTGCTAAAAGTTGGGTCAAATGAAGTTAAAATCTTGGGAATATGGGGCATGGGTGGAATAGGTAAAACCAGCCTTGCTCGTGCTTTATATGAGAAACTATCTGGCGAATTTGAAGGTCATTGCTTCCTCGAAAATGTAAGGGAAGAATCAGACAAGCACGGAGAAAAAGCTTTACGTAATAAACTTTTTTCTGAGTTGTTAGGGAATAAAAATCATTGTTTTGATGCAGGGTTTTCAGTAACCCAGTTTGTTTTGAGTAGGCTAGGACGCAAAAAAGTTTTCATAGTCTTGGATGATGTGGCTACCTCAGAGCAATTAGAAAATCTAATTGAAGATTTTGATTTCTTGGGACTCGGAAGTAGAGTCATTGTTACAAGTAGAAACAAGCAAATATTTAGCCAAGTTGATAAAATATATGAAGTAAAGGAATTGAACTTTCATCACTCTCTTCAACTTTTCAGTTTTACTGTTTTTAGAGAGAAACAACCTAAACATGGATATGAAGATGTATCAAGAAGAGCAACTTTGTATTGCAAAGGTGTTCCTTTGGCTTTAAAAGTTCTTGGTGCAAGTCTTCGTTCAAGAAGTAAGGGAGCATGGGAATGCGAATTGAGAAAACTCCAAAAGTTTCCAAATAAGAAAATTCATAGTGTATTAAAATTAAGTTATGATGGCTTAGATCACTCTCAAAAGGACATATTTCTAGACATTGCATGCTTCTTTAGAGGAAACCAGAGAGATCGTGTAACAAACATATTGGAAGCGTTTGATTTTTCTGCAATATCTGGGATAGAAGTCCTTCTGGATAGAGCTCTAATAACAATTTCAGGTGCCAATCAACTAGAAATGCATGACCTGATACAAGAAATGGGTTGGGAAGTTGTTCATCAAGAATGTATCAAAGACCCTGGAAGAAGAACTCGGTTGTGGAAACATGAGGAAGTGCATGATGTTTTCAAATATAACAGGGGAAGTGAAGTTATTGAAGGCATAATTTTAGATTTGTCTAAATTAATTGAGGATCTCTATTTGAGCTCTGATTTCCTGGCAAAGATGACTAACCTGAGATTTTTCAAAATCCATAGTTGGAGCAAGTTTAACATATTTAATGTGTATCTTCCTAATGGTCTCAATACATTGTCTCATAAAACGAGGTACCTTCATTGGGATGGATTCTGTCTTGAGTCTTTGCCATCTAACTTCTGTGCTGAACAACTTGTAGAGCTTTGCATGCGTTGTACCAAGCTTAAAAAGCTTTGGGATGGTGTTCAGGTTTGGCTAAAAAACCTTGTGAATTTGAAGACAATTGACCTCTGGGGATCCCGAGACTTGATTGAGATTCCAGACTTATCCAAGGCGGAAAAACTTGAAAATGTTTCTCTTTGCTATTGTGAAAGCTTGTGTCAGGTCCAAGTCCATTCAAAATCTCTTCTTGTACTAAACCTCTACGGTTGTTCATCACTCAGGAAATTTTCAGTGACATCAGAGGAACTGACAAGATTGAGCTTAGCTTTCACCGCTATATGCTCAATACCATCATCAATTTGGCACAAAAAGAAGCTTCAAGCTCTTAATCTAACGGGGTGTTGCAATCTCCAAGAGTTAACAGATGAACCAAGAATTTATGGCTCCCTCAAAGTATTGGCATCTAATGCTGAGAACATCAAAAGCCTTTCAACATTGAGAATGCTTTGGTTAGATGATTGTAAGAAACTTGTGTCTTTGCCCATGCTTCCGCCATCTCTTGAGAAGTTGAGTGCTAGTAATTGCACTTCTTTAGACTCATATATGACTCAAAGGCTGGTGTTACAACACATGCTGCAAACTCGCATACCCTACCTACGCAAACACTATCTAAGATGTTATGATGAAGAGTATTTACTTCCTGGAGAACATGTGATTCATGAGTGTGGGTTTCACACAACGGGGAGTTCAATAACTATTCCTTGTCTTTGGAAAACTGAATTGTACGGTTTCATTTATTGCATCATTCTCTCTAAGGGATCACTCTTGCTCAGTGAAGTTTCATGTTCTGTTTATCAAGATGGCATAAGGGTTGGCAGGTTCCAAAGATTGTTGGAATACGAAAGTTTGACTTCGAATCACGTGCTATATATGTATCATGACATCAATGAATTTGATACAATAACTGAAGTGCATGGTCATTTCTTCAGCAACATAACATTTATATTTGAAACTGGTGAAGCAAGCATAGAAGAGTTTGGCATCTTTCCCATATATGGCTCAGAATCAGGGTTGAAACTGGTTGGTAGCAGAGAAGTTTTTGAGTCGAAATTCAGTACCCAAATCTTTAAATTTACAACATATTTAGATAAGTATGCTTAG 2967 0.3768 MVDQQIIGVVASSSYSSSVVSSKGYDVFLSFRGEDTRKKFTSHLYDALKQKGVETFIDYRLEKGEEISSTLTQVIEDSHISIVIFSENYASSKWCLGELSKIMECKKEKGQIVIPVFYDIDPSHVRKQTGSYEKCFVTHKGEPMCNKWKAALTEAANLAAYDSQTYRVESELLKDIVEDVLQKMAAIYPNCHKGLVGIEEKYEKIESLLKVGSNEVKILGIWGMGGIGKTSLARALYEKLSGEFEGHCFLENVREESDKHGEKALRNKLFSELLGNKNHCFDAGFSVTQFVLSRLGRKKVFIVLDDVATSEQLENLIEDFDFLGLGSRVIVTSRNKQIFSQVDKIYEVKELNFHHSLQLFSFTVFREKQPKHGYEDVSRRATLYCKGVPLALKVLGASLRSRSKGAWECELRKLQKFPNKKIHSVLKLSYDGLDHSQKDIFLDIACFFRGNQRDRVTNILEAFDFSAISGIEVLLDRALITISGANQLEMHDLIQEMGWEVVHQECIKDPGRRTRLWKHEEVHDVFKYNRGSEVIEGIILDLSKLIEDLYLSSDFLAKMTNLRFFKIHSWSKFNIFNVYLPNGLNTLSHKTRYLHWDGFCLESLPSNFCAEQLVELCMRCTKLKKLWDGVQVWLKNLVNLKTIDLWGSRDLIEIPDLSKAEKLENVSLCYCESLCQVQVHSKSLLVLNLYGCSSLRKFSVTSEELTRLSLAFTAICSIPSSIWHKKKLQALNLTGCCNLQELTDEPRIYGSLKVLASNAENIKSLSTLRMLWLDDCKKLVSLPMLPPSLEKLSASNCTSLDSYMTQRLVLQHMLQTRIPYLRKHYLRCYDEEYLLPGEHVIHECGFHTTGSSITIPCLWKTELYGFIYCIILSKGSLLLSEVSCSVYQDGIRVGRFQRLLEYESLTSNHVLYMYHDINEFDTITEVHGHFFSNITFIFETGEASIEEFGIFPIYGSESGLKLVGSREVFESKFSTQIFKFTTYLDKYA* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00098 988 Gene3D Ribonuclease Inhibitor 682 816 IPR032675 -
Phacun372g00098 988 PRINTS Disease resistance protein signature 635 651 - -
Phacun372g00098 988 PRINTS Disease resistance protein signature 294 308 - -
Phacun372g00098 988 PRINTS Disease resistance protein signature 218 233 - -
Phacun372g00098 988 PRINTS Disease resistance protein signature 385 399 - -
Phacun372g00098 988 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Phacun372g00098 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 444 IPR027417 -
Phacun372g00098 988 Gene3D - 22 184 IPR035897 -
Phacun372g00098 988 Gene3D Ribonuclease Inhibitor 528 678 IPR032675 -
Phacun372g00098 988 ProSiteProfiles TIR domain profile. 23 184 IPR000157 GO:0007165
Phacun372g00098 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 802 IPR044974 GO:0006952
Phacun372g00098 988 Gene3D - 185 349 IPR027417 -
Phacun372g00098 988 Pfam NB-ARC domain 202 430 IPR002182 GO:0043531
Phacun372g00098 988 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Phacun372g00098 988 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 186 - -
Phacun372g00098 988 Pfam TIR domain 25 197 IPR000157 GO:0007165
Phacun372g00098 988 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 159 IPR035897 -
Phacun372g00098 988 Gene3D - 350 434 IPR042197 -
Phacun372g00098 988 SMART till_3 24 158 IPR000157 GO:0007165
Phacun372g00098 988 SUPERFAMILY L domain-like 547 826 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00098 21 767 WRKY Transcription Factor Family AT4G12020 31.468 7.11e-100 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00098 - - gmx:100793798 1530.38