Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00097 ATGGCTGCTATATACCCAAACTGCCACAAAGGATTGGTTGGAATTGAGGAAAAGTATGAAAAGATTGAGTCATTGCTAAAAGTTGGGTCAAATGAAGTTAAAATCTTGGGAATATGGGGCATGGGTGGAATAGGTAAAACCAGCCTTGCTCGTGCTTTATATGAGAAACTATCTGGCGAATTTGAAGGTCATTGCTTCCTCGAAAATGTAAGGGAAGAATCAGACAAGCACGGAGAAAAAGCTTTACGTAATAAACTTTTTTCTGAGTTGTTAGGGAATAAAAATCATTGTTTTGATGCAGGGTTTTCAGTAACCCAGTTTGTTTTGAGTAGGCTAGGACGCAAAAAAGTTTTCATAGTCTTGGATGATGTGGCTACCTCAGAGCAATTAGAAAATCTAATTGAAGATTTTGATTTCTTGGGACTCGGAAGTAGAGTCATTGTTACAAGTAGAAACAAGCAAATATTTAGCCAAGTTGATAAAATATATGAAGTAAAGGAATTGAACTTTCATCACTCTCTTCAACTTTTCAGTTTTACTGTTTTTAGAGAGAAACAACCTAAACATGGATATGAAGATGTATCAAGAAGAGCAACTTTGTATTGCAAAGGTGTTCCTTTGGCTTTAAAAGTTCTTGGTGCAAGTCTTCGTTCAAGAAGTAAGGGAGCATGGGAATGCGAATTGAGAAAACTCCAAAAGTTTCCAAATAAGAAAATTCATAGTGTATTAAAATTAAGTTATGATGGCTTAGATCACTCTCAAAAGGACATATTTCTAGACATTGCATGCTTCTTTAGAGGAAACCAGAGAGATCGTGTAACAAACATATTGGAAGCGTTTGATTTTTCTGCAATATCTGGGATAGAAGTCCTTCTGGATAGAGCTCTAATAACAATTTCAGGTGCCAATCAACTAGAAATGCATGACCTGATACAAGAAATGGGTTGGGAAGTTGTTCATCAAGAATGTATCAAAGACCCTGGAAGAAGAACTCGGTTGTGGAAACATGAGGAAGTGCATGATGTTTTCAAATATAACAGGGGAAGTGAAGTTATTGAAGGCATAATTTTAGATTTGTCTAAATTAATTGAGGATCTCTATTTGAGCTCTGATTTCCTGGCAAAGATGACTAACCTGAGATTTTTCAAAATCCATAGTTGGAGCAAGTTTAACATATTTAATGTGTATCTTCCTAATGGTCTCAATACATTGTCTCATAAAACGAGGTACCTTCATTGGGATGGATTCTGTCTTGAGTCTTTGCCATCTAACTTCTGTGCTGAACAACTTGTAGAGCTTTGCATGCGTTGTACCAAGCTTAAAAAGCTTTGGGATGGTGTTCAGAACCTTGTGAATTTGAAGACAATTGACCTCTGGGGATCCCGAGACTTGATTGAGATTCCAGACTTATCCAAGGCGGAAAAACTTGAAAATGTTTCTCTTTGCTATTGTGAAAGCTTGTGTCAGGTCCAAGTCCATTCAAAATCTCTTCTTGTACTAAACCTCTACGGTTGTTCATCACTCAGGAAATTTTCAGTGACATCAGAGGAACTGACAAGATTGAGCTTAGCTTTCACCGCTATATGCTCAATACCATCATCAATTTGGCACAAAAAGAAGCTTCAAGCTCTTAATCTAACGGGGTGTTGCAATCTCCAAGAGTTAACAGATGAACCAAGAATTTATGGCTCCCTCAAAGTATTGGCATCTAATGCTGAGAACATCAAAAGCCTTTCAACATTGAGAATGCTTTGGTTAGATGATTGTAAGAAACTTGTGTCTTTGCCCATGCTTCCGCCATCTCTTGAGAAGTTGAGTGCTAGTAATTGCACTTCTTTAGACTCATATATGACTCAAAGGCTGGTGTTACAACACATGCTGCAAACTCGCATACCCTACCTACGCAAACACTATCTAAGATGTTATGATGAAGAGTATTTACTTCCTGGAGAACATGTGATTCATGAGTGTGGGTTTCACACAACGGGGAGTTCAATAACTATTCCTTGTCTTTGGAAAACTGAATTGTACGGTTTCATTTATTGCATCATTCTCTCTAAGGGATCACTCTTGCTCAGTGAAGTTTCATGTTCTGTTTATCAAGATGGCATAAGGGTTGGCAGGTTCCAAAGATTGTTGGAATACGAAAGTTTGACTTCGAATCACGTGCTATATATGTATCATGACATCAATGAATTTGATACAATAACTGAAGTGCATGGTCATTTCTTCAGCAACATAACATTTATATTTGAAACTGGTGAAGCAAGCATAGAAGAGTTTGGCATCTTTCCCATATATGGCTCAGAATCAGGGTTGAAACTGGTTGGTAGCAGAGAAGTTTTTGAGTCGAAATTCAGTACCCAAATCTTTAAATTTACAACATATTTAGATAAGTATGCTTAG 2406 0.3728 MAAIYPNCHKGLVGIEEKYEKIESLLKVGSNEVKILGIWGMGGIGKTSLARALYEKLSGEFEGHCFLENVREESDKHGEKALRNKLFSELLGNKNHCFDAGFSVTQFVLSRLGRKKVFIVLDDVATSEQLENLIEDFDFLGLGSRVIVTSRNKQIFSQVDKIYEVKELNFHHSLQLFSFTVFREKQPKHGYEDVSRRATLYCKGVPLALKVLGASLRSRSKGAWECELRKLQKFPNKKIHSVLKLSYDGLDHSQKDIFLDIACFFRGNQRDRVTNILEAFDFSAISGIEVLLDRALITISGANQLEMHDLIQEMGWEVVHQECIKDPGRRTRLWKHEEVHDVFKYNRGSEVIEGIILDLSKLIEDLYLSSDFLAKMTNLRFFKIHSWSKFNIFNVYLPNGLNTLSHKTRYLHWDGFCLESLPSNFCAEQLVELCMRCTKLKKLWDGVQNLVNLKTIDLWGSRDLIEIPDLSKAEKLENVSLCYCESLCQVQVHSKSLLVLNLYGCSSLRKFSVTSEELTRLSLAFTAICSIPSSIWHKKKLQALNLTGCCNLQELTDEPRIYGSLKVLASNAENIKSLSTLRMLWLDDCKKLVSLPMLPPSLEKLSASNCTSLDSYMTQRLVLQHMLQTRIPYLRKHYLRCYDEEYLLPGEHVIHECGFHTTGSSITIPCLWKTELYGFIYCIILSKGSLLLSEVSCSVYQDGIRVGRFQRLLEYESLTSNHVLYMYHDINEFDTITEVHGHFFSNITFIFETGEASIEEFGIFPIYGSESGLKLVGSREVFESKFSTQIFKFTTYLDKYA* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00097 801 Gene3D - 167 251 IPR042197 -
Phacun372g00097 801 Pfam Leucine Rich Repeat 429 448 IPR011713 -
Phacun372g00097 801 SUPERFAMILY L domain-like 364 639 - -
Phacun372g00097 801 Pfam NB-ARC domain 19 247 IPR002182 GO:0043531
Phacun372g00097 801 PRINTS Disease resistance protein signature 448 464 - -
Phacun372g00097 801 PRINTS Disease resistance protein signature 35 50 - -
Phacun372g00097 801 PRINTS Disease resistance protein signature 202 216 - -
Phacun372g00097 801 PRINTS Disease resistance protein signature 111 125 - -
Phacun372g00097 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 261 IPR027417 -
Phacun372g00097 801 SUPERFAMILY "Winged helix" DNA-binding domain 237 343 IPR036390 -
Phacun372g00097 801 Gene3D Ribonuclease Inhibitor 320 641 IPR032675 -
Phacun372g00097 801 Gene3D - 3 166 IPR027417 -
Phacun372g00097 801 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 615 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00097 13 615 WRKY Transcription Factor Family AT5G45050 35.681 7.87e-96 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00097 - - gmx:100793798 1253.04