Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00096 ATGGCTGCTATATACCCAAACTGCCACAAAGGATTGGTTGGAATTGAGGAAAAGTATGAAAAGATTGAGTCATTGCTAAAAGTTGGGTCAAATGAAGTTAAAATCTTGGGAATATGGGGCATGGGTGGAATAGGTAAAACCAGCCTTGCTCGTGCTTTATATGAGAAACTATCTGGCGAATTTGAAGGTCATTGCTTCCTCGAAAATGTAAGGGAAGAATCAGACAAGCACGGAGAAAAAGCTTTACGTAATAAACTTTTTTCTGAGTTGTTAGGGAATAAAAATCATTGTTTTGATGCAGGGTTTTCAGTAACCCAGTTTGTTTTGAGTAGGCTAGGACGCAAAAAAGTTTTCATAGTCTTGGATGATGTGGCTACCTCAGAGCAATTAGAAAATCTAATTGAAGATTTTGATTTCTTGGGACTCGGAAGTAGAGTCATTGTTACAAGTAGAAACAAGCAAATATTTAGCCAAGTTGATAAAATATATGAAGTAAAGGAATTGAACTTTCATCACTCTCTTCAACTTTTCAGTTTTACTGTTTTTAGAGAGAAACAACCTAAACATGGATATGAAGATGTATCAAGAAGAGCAACTTTGTATTGCAAAGGTGTTCCTTTGGCTTTAAAAGTTCTTGGTGCAAGTCTTCGTTCAAGAAGTAAGGGAGCATGGGAATGCGAATTGAGAAAACTCCAAAAGTTTCCAAATAAGAAAATTCATAGTGTATTAAAATTAAGTTATGATGGCTTAGATCACTCTCAAAAGGACATATTTCTAGACATTGCATGCTTCTTTAGAGGAAACCAGAGAGATCGTGTAACAAACATATTGGAAGCGTTTGATTTTTCTGCAATATCTGGGATAGAAGTCCTTCTGGATAGAGCTCTAATAACAATTTCAGGTGCCAATCAACTAGAAATGCATGACCTGATACAAGAAATGGGTTGGGAAGTTGTTCATCAAGAATGTATCAAAGACCCTGGAAGAAGAACTCGGTTGTGGAAACATGAGGAAGTGCATGATGTTTTCAAATATAACAGGGGAAGTGAAGTTATTGAAGGCATAATTTTAGATTTGTCTAAATTAATTGAGGATCTCTATTTGAGCTCTGATTTCCTGGCAAAGATGACTAACCTGAGATTTTTCAAAATCCATAGTTGGAGCAAGTTTAACATATTTAATGTGTATCTTCCTAATGGTCTCAATACATTGTCTCATAAAACGAGGTACCTTCATTGGGATGGATTCTGTCTTGAGTCTTTGCCATCTAACTTCTGTGCTGAACAACTTGTAGAGCTTTGCATGCGTTGTACCAAGCTTAAAAAGCTTTGGGATGGTGTTCAGGTTTGGCTAAAAAACCTTGTGAATTTGAAGACAATTGACCTCTGGGGATCCCGAGACTTGATTGAGATTCCAGACTTATCCAAGGCGGAAAAACTTGAAAATGTTTCTCTTTGCTATTGTGAAAGCTTGTGTCAGGTCCAAGTCCATTCAAAATCTCTTCTTGTACTAAACCTCTACGGTTGTTCATCACTCAGGAAATTTTCAGTGACATCAGAGGAACTGACAAGATTGAGCTTAGCTTTCACCGCTATATGCTCAATACCATCATCAATTTGGCACAAAAAGAAGCTTCAAGCTCTTAATCTAACGGGGTGTTGCAATCTCCAAGAGTTAACAGATGAACCAAGAATTTATGGCTCCCTCAAAGTATTGGCATCTAATGCTGAGAACATCAAAAGCCTTTCAACATTGAGAATGCTTTGGTTAGATGATTGTAAGAAACTTGTGTCTTTGCCCATGCTTCCGCCATCTCTTGAGAAGTTGAGTGCTAGTAATTGCACTTCTTTAGACTCATATATGACTCAAAGGCTGGTGTTACAACACATGCTGCAAACTCGCATACCCTACCTACGCAAACACTATCTAAGATGTTATGATGAAGAGTATTTACTTCCTGGAGAACATGTGATTCATGAGTGTGGGTTTCACACAACGGGGAGTTCAATAACTATTCCTTGTCTTTGGAAAACTGAATTGTACGGTTTCATTTATTGCATCATTCTCTCTAAGGGATCACTCTTGCTCAGTGAAGTTTCATGTTCTGTTTATCAAGATGGCATAAGGGTTGGCAGGTTCCAAAGATTGTTGGAATACGAAAGTTTGACTTCGAATCACGTGCTATATATGTATCATGACATCAATGAATTTGATACAATAACTGAAGTGCATGGTCATTTCTTCAGCAACATAACATTTATATTTGAAACTGGTGAAGCAAGCATAGAAGAGTTTGGCATCTTTCCCATATATGGCTCAGAATCAGGGTTGAAACTGGTTGGTAGCAGAGAAGTTTTTGAGTCGAAATTCAGTACCCAAATCTTTAAATTTACAACATATTTAGATAAGTATGCTTAG 2418 0.3726 MAAIYPNCHKGLVGIEEKYEKIESLLKVGSNEVKILGIWGMGGIGKTSLARALYEKLSGEFEGHCFLENVREESDKHGEKALRNKLFSELLGNKNHCFDAGFSVTQFVLSRLGRKKVFIVLDDVATSEQLENLIEDFDFLGLGSRVIVTSRNKQIFSQVDKIYEVKELNFHHSLQLFSFTVFREKQPKHGYEDVSRRATLYCKGVPLALKVLGASLRSRSKGAWECELRKLQKFPNKKIHSVLKLSYDGLDHSQKDIFLDIACFFRGNQRDRVTNILEAFDFSAISGIEVLLDRALITISGANQLEMHDLIQEMGWEVVHQECIKDPGRRTRLWKHEEVHDVFKYNRGSEVIEGIILDLSKLIEDLYLSSDFLAKMTNLRFFKIHSWSKFNIFNVYLPNGLNTLSHKTRYLHWDGFCLESLPSNFCAEQLVELCMRCTKLKKLWDGVQVWLKNLVNLKTIDLWGSRDLIEIPDLSKAEKLENVSLCYCESLCQVQVHSKSLLVLNLYGCSSLRKFSVTSEELTRLSLAFTAICSIPSSIWHKKKLQALNLTGCCNLQELTDEPRIYGSLKVLASNAENIKSLSTLRMLWLDDCKKLVSLPMLPPSLEKLSASNCTSLDSYMTQRLVLQHMLQTRIPYLRKHYLRCYDEEYLLPGEHVIHECGFHTTGSSITIPCLWKTELYGFIYCIILSKGSLLLSEVSCSVYQDGIRVGRFQRLLEYESLTSNHVLYMYHDINEFDTITEVHGHFFSNITFIFETGEASIEEFGIFPIYGSESGLKLVGSREVFESKFSTQIFKFTTYLDKYA* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00096 805 SUPERFAMILY L domain-like 364 643 - -
Phacun372g00096 805 Gene3D Ribonuclease Inhibitor 342 497 IPR032675 -
Phacun372g00096 805 Pfam Leucine Rich Repeat 429 448 IPR011713 -
Phacun372g00096 805 PRINTS Disease resistance protein signature 35 50 - -
Phacun372g00096 805 PRINTS Disease resistance protein signature 111 125 - -
Phacun372g00096 805 PRINTS Disease resistance protein signature 452 468 - -
Phacun372g00096 805 PRINTS Disease resistance protein signature 202 216 - -
Phacun372g00096 805 SUPERFAMILY "Winged helix" DNA-binding domain 237 343 IPR036390 -
Phacun372g00096 805 Gene3D - 167 251 IPR042197 -
Phacun372g00096 805 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 617 IPR044974 GO:0006952
Phacun372g00096 805 Pfam NB-ARC domain 19 247 IPR002182 GO:0043531
Phacun372g00096 805 Gene3D - 3 166 IPR027417 -
Phacun372g00096 805 Gene3D Ribonuclease Inhibitor 499 634 IPR032675 -
Phacun372g00096 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 261 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00096 13 619 WRKY Transcription Factor Family AT5G45050 35.614 3.37e-94 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00096 - - gmx:100793798 1247.26