Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00094 ATGGTTGATCAACAAATTATCGGTGTTGTTGCTTCATCCTCTTACTCTTCTTCAGTTGTATCATCTAAAGGATATGACGTGTTTCTAAGCTTTCGAGGTGAGGACACCCGCAAGAAATTCACAAGCCATCTTTATGATGCTTTGAAGCAAAAGGGAGTTGAAACCTTTATCGACTATCGTCTTGAAAAGGGAGAGGAGATCTCATCAACTCTCACCCAAGTAATTGAAGATTCCCATATATCTATTGTCATCTTCTCAGAGAACTATGCTTCCTCAAAGTGGTGCTTGGGTGAACTCAGCAAGATTATGGAATGTAAGAAAGAAAAAGGACAGATTGTGATACCAGTGTTCTATGACATAGATCCATCCCATGTAAGGAAGCAAACTGGAAGCTATGAGAAATGTTTTGTAACTCATAAGGGAGAACCCATGTGCAACAAATGGAAAGCTGCTCTCACTGAAGCAGCCAATTTGGCTGCATATGACTCTCAAACTTACAGGGTTGAATCTGAACTCCTTAAGGATATTGTTGAAGATGTTTTGCAAAAAATGGCTGCTATATACCCAAACTGCCACAAAGGATTGGTTGGAATTGAGGAAAAGTATGAAAAGATTGAGTCATTGCTAAAAGTTGGGTCAAATGAAGTTAAAATCTTGGGAATATGGGGCATGGGTGGAATAGGTAAAACCAGCCTTGCTCGTGCTTTATATGAGAAACTATCTGGCGAATTTGAAGGTCATTGCTTCCTCGAAAATGTAAGGGAAGAATCAGACAAGCACGGAGAAAAAGCTTTACGTAATAAACTTTTTTCTGAGTTGTTAGGGAATAAAAATCATTGTTTTGATGCAGGGTTTTCAGTAACCCAGTTTGTTTTGAGTAGGCTAGGACGCAAAAAAGTTTTCATAGTCTTGGATGATGTGGCTACCTCAGAGCAATTAGAAAATCTAATTGAAGATTTTGATTTCTTGGGACTCGGAAGTAGAGTCATTGTTACAAGTAGAAACAAGCAAATATTTAGCCAAGTTGATAAAATATATGAAGTAAAGGAATTGAACTTTCATCACTCTCTTCAACTTTTCAGTTTTACTGTTTTTAGAGAGAAACAACCTAAACATGGATATGAAGATGTATCAAGAAGAGCAACTTTGTATTGCAAAGGTGTTCCTTTGGCTTTAAAAGTTCTTGGTGCAAGTCTTCGTTCAAGAAGTAAGGGAGCATGGGAATGCGAATTGAGAAAACTCCAAAAGTTTCCAAATAAGAAAATTCATAGTGTATTAAAATTAAGTTATGATGGCTTAGATCACTCTCAAAAGGACATATTTCTAGACATTGCATGCTTCTTTAGAGGAAACCAGAGAGATCGTGTAACAAACATATTGGAAGCGTTTGATTTTTCTGCAATATCTGGGATAGAAGTCCTTCTGGATAGAGCTCTAATAACAATTTCAGGTGCCAATCAACTAGAAATGCATGACCTGATACAAGAAATGGGTTGGGAAGTTGTTCATCAAGAATGTATCAAAGACCCTGGAAGAAGAACTCGGTTGTGGAAACATGAGGAAGTGCATGATGTTTTCAAATATAACAGGGGAAGTGAAGTTATTGAAGGCATAATTTTAGATTTGTCTAAATTAATTGAGGATCTCTATTTGAGCTCTGATTTCCTGGCAAAGATGACTAACCTGAGATTTTTCAAAATCCATAGTTGGAGCAAGTTTAACATATTTAATGTGTATCTTCCTAATGGTCTCAATACATTGTCTCATAAAACGAGGTACCTTCATTGGGATGGATTCTGTCTTGAGTCTTTGCCATCTAACTTCTGTGCTGAACAACTTGTAGAGCTTTGCATGCGTTGTACCAAGCTTAAAAAGCTTTGGGATGGTGTTCAGAACCTTGTGAATTTGAAGACAATTGACCTCTGGGGATCCCGAGACTTGATTGAGATTCCAGACTTATCCAAGGCGGAAAAACTTGAAAATGTTTCTCTTTGCTATTGTGAAAGCTTGTGTCAGGTCCAAGTCCATTCAAAATCTCTTCTTGTACTAAACCTCTACGGTTGTTCATCACTCAGGAAATTTTCAGTGACATCAGAGGAACTGACAAGATTGAGCTTAGCTTTCACCGCTATATGCTCAATACCATCATCAATTTGGCACAAAAAGAAGCTTCAAGCTCTTAATCTAACGGGGTGTTGCAATCTCCAAGAGTTAACAGATGAACCAAGAATTTATGGCTCCCTCAAAGTATTGGCATCTAATGCTGAGAACATCAAAAGCCTTTCAACATTGAGAATGCTTTGGTTAGATGATTGTAAGAAACTTGTGTCTTTGCCCATGCTTCCGCCATCTCTTGAGAAGTTGAGTGCTAGTAATTGCACTTCTTTAGACTCATATATGACTCAAAGGCTGGTGTTACAACACATGCTGCAAACTCGCATACCCTACCTACGCAAACACTATCTAAGATGTTATGATGAAGAGTATTTACTTCCTGGAGAACATGTGATTCATGAGTGTGGGTTTCACACAACGGGGAGTTCAATAACTATTCCTTGTCTTTGGAAAACTGAATTGTACGGTTTCATTTATTGCATCATTCTCTCTAAGGGATCACTCTTGCTCAGTGAAGTTTCATGTTCTGTTTATCAAGATGGCATAAGGGTTGGCAGGTTCCAAAGATTGTTGGAATACGAAAGTTTGACTTCGAATCACGTGCTATATATGTATCATGACATCAATGAATTTGATACAATAACTGAAGTGCATGGTCATTTCTTCAGCAACATAACATTTATATTTGAAACTGGTGAAGCAAGCATAGAAGAGTTTGGCATCTTTCCCATATATGGCTCAGAATCAGGGTTGAAACTGGTTGGTAGCAGAGAAGTTTTTGAGTCGAAATTCAGTACCCAAATCTTTAAATTTACAACATATTTAGATAAGTATGCTTAG 2955 0.377 MVDQQIIGVVASSSYSSSVVSSKGYDVFLSFRGEDTRKKFTSHLYDALKQKGVETFIDYRLEKGEEISSTLTQVIEDSHISIVIFSENYASSKWCLGELSKIMECKKEKGQIVIPVFYDIDPSHVRKQTGSYEKCFVTHKGEPMCNKWKAALTEAANLAAYDSQTYRVESELLKDIVEDVLQKMAAIYPNCHKGLVGIEEKYEKIESLLKVGSNEVKILGIWGMGGIGKTSLARALYEKLSGEFEGHCFLENVREESDKHGEKALRNKLFSELLGNKNHCFDAGFSVTQFVLSRLGRKKVFIVLDDVATSEQLENLIEDFDFLGLGSRVIVTSRNKQIFSQVDKIYEVKELNFHHSLQLFSFTVFREKQPKHGYEDVSRRATLYCKGVPLALKVLGASLRSRSKGAWECELRKLQKFPNKKIHSVLKLSYDGLDHSQKDIFLDIACFFRGNQRDRVTNILEAFDFSAISGIEVLLDRALITISGANQLEMHDLIQEMGWEVVHQECIKDPGRRTRLWKHEEVHDVFKYNRGSEVIEGIILDLSKLIEDLYLSSDFLAKMTNLRFFKIHSWSKFNIFNVYLPNGLNTLSHKTRYLHWDGFCLESLPSNFCAEQLVELCMRCTKLKKLWDGVQNLVNLKTIDLWGSRDLIEIPDLSKAEKLENVSLCYCESLCQVQVHSKSLLVLNLYGCSSLRKFSVTSEELTRLSLAFTAICSIPSSIWHKKKLQALNLTGCCNLQELTDEPRIYGSLKVLASNAENIKSLSTLRMLWLDDCKKLVSLPMLPPSLEKLSASNCTSLDSYMTQRLVLQHMLQTRIPYLRKHYLRCYDEEYLLPGEHVIHECGFHTTGSSITIPCLWKTELYGFIYCIILSKGSLLLSEVSCSVYQDGIRVGRFQRLLEYESLTSNHVLYMYHDINEFDTITEVHGHFFSNITFIFETGEASIEEFGIFPIYGSESGLKLVGSREVFESKFSTQIFKFTTYLDKYA* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00094 984 Gene3D - 350 434 IPR042197 -
Phacun372g00094 984 Gene3D Ribonuclease Inhibitor 699 815 IPR032675 -
Phacun372g00094 984 Gene3D Ribonuclease Inhibitor 528 698 IPR032675 -
Phacun372g00094 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 444 IPR027417 -
Phacun372g00094 984 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 797 IPR044974 GO:0006952
Phacun372g00094 984 PRINTS Disease resistance protein signature 294 308 - -
Phacun372g00094 984 PRINTS Disease resistance protein signature 218 233 - -
Phacun372g00094 984 PRINTS Disease resistance protein signature 631 647 - -
Phacun372g00094 984 PRINTS Disease resistance protein signature 385 399 - -
Phacun372g00094 984 ProSiteProfiles TIR domain profile. 23 184 IPR000157 GO:0007165
Phacun372g00094 984 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Phacun372g00094 984 SUPERFAMILY L domain-like 547 822 - -
Phacun372g00094 984 Gene3D - 185 349 IPR027417 -
Phacun372g00094 984 Pfam NB-ARC domain 202 430 IPR002182 GO:0043531
Phacun372g00094 984 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Phacun372g00094 984 Gene3D - 22 184 IPR035897 -
Phacun372g00094 984 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 186 - -
Phacun372g00094 984 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 159 IPR035897 -
Phacun372g00094 984 SMART till_3 24 158 IPR000157 GO:0007165
Phacun372g00094 984 Pfam TIR domain 25 197 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00094 21 763 WRKY Transcription Factor Family AT4G12020 31.468 1.21e-99 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00094 - - gmx:100793798 1536.16