Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00044 ATGGCTTTCACAGTAGAGAGGTTTGAGGAGAACATGGTGTTCTCTTTTGAGTCTCAGAAGTCAGTGCCAGCACCTTTCCTCACAAAGACATATCAGCTAGTTGAAGACCCTCTCACTGACCACATTGTTTCATGGGGTGAAGATGACACTACATTTGTTGTGTGGAGACCCCCTGAGTTTTCCAGAGATCTTCTTCCCAACTATTTCAAACACAACAACTTCTCAAGCTTTGTTAGGCAACTCAACACCTATGGTTTCAAGAAGGTAGTTGCTGATAGGTGGGAGTTTGCAAATGAGTACTTCAAAAAAGGAGCTAAGCACCTTTTGTGTGAAATACACAGGAGGAAAACACCTCAGCTACATCACCAACTCTACCATGACCAACCACCATCCCAGATTCTTCAACAAGAAGAAAGTCTCTGCTGGCTTGACACTCCACTTTCATCTCCAAAACCAAGCACAGACTTTCTAACAGCCCTTTCCGAAGACAACCAAAGACTAAGGAGAAAGAACTTCATGCTTTTGTCAGAACTTAGTCACATGAAGAGTTTGTACAATGACATAATATATTTCATCCAAAACCATGTAAAAGCACCACCCTTTGAACAAAGAACCAGCAGTGCCATTCAAAAGCTGGTGGAGTTTGACTCGTTGAATGAGCCTATAAATAACATAAGTCTCAGAACTTCAAAAAGTAGTTTTGTGGATAAATCCTTGTTCACTTCTACTGAAGAATCAGACAGTTCTGTGAAGCTCTTTGGGGTCCTTCTAAGTGGCAGAAAGAGATTGCACCCAGATAACATTAATTGA 810 0.4136 MAFTVERFEENMVFSFESQKSVPAPFLTKTYQLVEDPLTDHIVSWGEDDTTFVVWRPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFKKGAKHLLCEIHRRKTPQLHHQLYHDQPPSQILQQEESLCWLDTPLSSPKPSTDFLTALSEDNQRLRRKNFMLLSELSHMKSLYNDIIYFIQNHVKAPPFEQRTSSAIQKLVEFDSLNEPINNISLRTSKSSFVDKSLFTSTEESDSSVKLFGVLLSGRKRLHPDNIN* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00044 269 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phacun372g00044 269 Gene3D - 17 117 IPR036388 -
Phacun372g00044 269 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 209 IPR027725 -
Phacun372g00044 269 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phacun372g00044 269 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phacun372g00044 269 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phacun372g00044 269 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phacun372g00044 269 FunFam Heat stress transcription factor B-4 18 116 - -
Phacun372g00044 269 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Phacun372g00044 269 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00044 10 264 HSF AT1G46264 50.000 1.39e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phacun372g00044 HSF_DNA-bind 1.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00044 K09419 - gmx:100806150 471.855