Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00020 ATGAGCAACAATCCAACACCAAGCTCTTACTCAGACTCCGTTTCCTCCGAAGACCACCACATTGGCTCCTCCTCCCAACGCAGTCCACCACCAGCAGCAGCAGCAGCAGCCACCTCCACCAACCAGCAAGTCACAACCCCATCTTCAAGGAAGCCACGTGGTCGGCCACTAGGTTCCAAGAACAAGTCAAGGTCCATCCCTCTGCCAGTGTCCCTACCAACTGAGCCCTTCGTAAACGTCCTGGTTGTGAACGTGGATCCAAATAGGGACATCATGGAGTGCATCCTTGACATTGCTCACCAAGGCCAGGTCAGCCTATCGGTCCTTAGTGCCTTTGGCACCGTCAATAGCGTAACCCTTCGCAACTCAACCCATGGTGCCCCATACCTCGTGCTCCATGGTCCATTCAAATTACTCTCCCTTACTGGCTCCTACTTATACAACAATCACTACACCCTTCACCTTGGAGCCACCCCTCCTTCTCCCTTATCCTTTGGAATCAACTTCTCCACCACTAAAGGCGAAATCTTTACTGGCGTTATCGGTGGCAGAGTCGTCGCTGGTGAGGGCGTCACCTTGACAGTTTCCACCTACAAGAATCCTCATATTTTGAAGTACACTCCTGAAAGTGATGAAGGGGATCACAACCACAGCAACAACAATGATAAATGA 672 0.5134 MSNNPTPSSYSDSVSSEDHHIGSSSQRSPPPAAAAAATSTNQQVTTPSSRKPRGRPLGSKNKSRSIPLPVSLPTEPFVNVLVVNVDPNRDIMECILDIAHQGQVSLSVLSAFGTVNSVTLRNSTHGAPYLVLHGPFKLLSLTGSYLYNNHYTLHLGATPPSPLSFGINFSTTKGEIFTGVIGGRVVAGEGVTLTVSTYKNPHILKYTPESDEGDHNHSNNNDK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00020 223 CDD DUF296 79 188 IPR005175 -
Phacun372g00020 223 ProSiteProfiles PPC domain profile profile. 74 218 IPR005175 -
Phacun372g00020 223 MobiDBLite consensus disorder prediction 205 223 - -
Phacun372g00020 223 MobiDBLite consensus disorder prediction 1 68 - -
Phacun372g00020 223 MobiDBLite consensus disorder prediction 1 52 - -
Phacun372g00020 223 MobiDBLite consensus disorder prediction 204 223 - -
Phacun372g00020 223 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 217 IPR014476 GO:0003680
Phacun372g00020 223 Gene3D - 77 217 - -
Phacun372g00020 223 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 204 - -
Phacun372g00020 223 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 197 IPR005175 -
Phacun372g00020 223 FunFam AT-hook motif nuclear-localized protein 17 77 214 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00020 50 216 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.586 3.19e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00020 - - vra:106779930 308.916